RNA–Protein interactions for RNA: ENST00000542142.1

MMP17-208, Transcript of matrix metallopeptidase 17, humanhuman

TSL 4

Gene MMP17, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-208ENST00000542142 FAM213AQ9BRX8 229 aa17■□□□□ 0.31
MMP17-208ENST00000542142 TTPALQ9BTX7 342 aa17■□□□□ 0.31
MMP17-208ENST00000542142 ASB7Q9H672 318 aa17■□□□□ 0.31
MMP17-208ENST00000542142 SLC39A2Q9NP94 309 aa17■□□□□ 0.31
MMP17-208ENST00000542142 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17■□□□□ 0.31
MMP17-208ENST00000542142 EXOC1Q9NV70 894 aa17■□□□□ 0.31
MMP17-208ENST00000542142 TUBGCP4Q9UGJ1 667 aa17■□□□□ 0.31
MMP17-208ENST00000542142 UBQLN1Q9UMX0 589 aaKnown RBP17■□□□□ 0.31
MMP17-208ENST00000542142 FAM50BQ9Y247 325 aa17■□□□□ 0.31
MMP17-208ENST00000542142 DERAQ9Y315 318 aa17■□□□□ 0.31
MMP17-208ENST00000542142 KIAA0391O15091 583 aaKnown RBP16.99■□□□□ 0.31
MMP17-208ENST00000542142 ADH1AP07327 375 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 KLRC2P26717 231 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 CREMQ03060 361 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 SMAD4Q13485 552 aaKnown RBP16.99■□□□□ 0.31
MMP17-208ENST00000542142 BMT2Q1RMZ1 405 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 KMT5BQ4FZB7 885 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 RTP2Q5QGT7 225 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 JADE1Q6IE81 842 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 ARMCX5Q6P1M9 558 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.99■□□□□ 0.31
MMP17-208ENST00000542142 FMR1NBQ8N0W7 255 aaPredicted RBP16.99■□□□□ 0.31
MMP17-208ENST00000542142 SMRP1Q8NCR6 262 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 ADAMTS19Q8TE59 1207 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 SLC22A17Q8WUG5 538 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 RIN2Q8WYP3 895 aaPredicted RBP16.99■□□□□ 0.31
MMP17-208ENST00000542142 SAAL1Q96ER3 474 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 CCDC34Q96HJ3 373 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 COL25A1Q9BXS0 654 aaPredicted RBP16.99■□□□□ 0.31
MMP17-208ENST00000542142 FNIP2Q9P278 1114 aa16.99■□□□□ 0.31
MMP17-208ENST00000542142 TEX28O15482 410 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 EXTL3O43909 919 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 IL18RAPO95256 599 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 RPN1P04843 607 aaKnown RBP16.98■□□□□ 0.31
MMP17-208ENST00000542142 HOXB8P17481 243 aaPredicted RBP16.98■□□□□ 0.31
MMP17-208ENST00000542142 FGFR3P22607 806 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 LRPAP1P30533 357 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 CLCN4P51793 760 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 SNRPFP62306 86 aaKnown RBP16.98■□□□□ 0.31
MMP17-208ENST00000542142 DPYDQ12882 1025 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 STK4Q13043 487 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 TMEM132DQ14C87 1099 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 SPATA1Q5VX52 437 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 ANKRD54Q6NXT1 300 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 PDXDC1Q6P996 788 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 CEP57Q86XR8 500 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 ENGASEQ8NFI3 743 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 PIK3R5Q8WYR1 880 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 PCIF1Q9H4Z3 704 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 C2CD2Q9Y426 696 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 NUB1Q9Y5A7 615 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 TCHHQ07283 1943 aa16.98■□□□□ 0.31
MMP17-208ENST00000542142 TGFB1I1O43294 461 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 MBTPS2O43462 519 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 C1RP00736 705 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 NFICP08651 508 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 PRR29P0C7W0 189 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 EPCAMP16422 314 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 BRCC3P46736 316 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 FAM160A1Q05DH4 1040 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 SNW1Q13573 536 aaKnown RBP16.97■□□□□ 0.31
MMP17-208ENST00000542142 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
MMP17-208ENST00000542142 PRSS55Q6UWB4 352 aaPredicted RBP16.97■□□□□ 0.31
MMP17-208ENST00000542142 HS2ST1Q7LGA3 356 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 BRSK2Q8IWQ3 736 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 NELFCDQ8IXH7 590 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 GPD1LQ8N335 351 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 ZSWIM2Q8NEG5 633 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 BEST2Q8NFU1 509 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 LNX1Q8TBB1 728 aaPredicted RBP16.97■□□□□ 0.31
MMP17-208ENST00000542142 CCDC47Q96A33 483 aaKnown RBP16.97■□□□□ 0.31
MMP17-208ENST00000542142 AGPAT3Q9NRZ7 376 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 DZANK1Q9NVP4 752 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 RBAKQ9NYW8 714 aaPredicted RBP16.97■□□□□ 0.31
MMP17-208ENST00000542142 CGNQ9P2M7 1197 aaKnown RBP16.97■□□□□ 0.31
MMP17-208ENST00000542142 BRWD1Q9NSI6 2320 aa16.97■□□□□ 0.31
MMP17-208ENST00000542142 GOLGA8IPA6NC78 632 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 GOLGA8JA6NMD2 632 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 I3L4J1 428 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 IL9P15248 144 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 SMAD2Q15796 467 aaKnown RBP16.96■□□□□ 0.31
MMP17-208ENST00000542142 PSMD5Q16401 504 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 SYCE2Q6PIF2 218 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 NT5DC4Q86YG4 428 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 KIAA0895Q8NCT3 520 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 UHRF1Q96T88 793 aaPredicted RBP16.96■□□□□ 0.31
MMP17-208ENST00000542142 S1PR5Q9H228 398 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 KIAA1586Q9HCI6 787 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 HSPBP1Q9NZL4 362 aa16.96■□□□□ 0.31
MMP17-208ENST00000542142 SYN3O14994 580 aa16.95■□□□□ 0.3
MMP17-208ENST00000542142 RHOBTB3O94955 611 aa16.95■□□□□ 0.3
MMP17-208ENST00000542142 GLUD1P00367 558 aa16.95■□□□□ 0.3
MMP17-208ENST00000542142 RPL17P18621 184 aaKnown RBP16.95■□□□□ 0.3
MMP17-208ENST00000542142 TKTP29401 623 aaKnown RBP16.95■□□□□ 0.3
MMP17-208ENST00000542142 MCM4P33991 863 aa16.95■□□□□ 0.3
MMP17-208ENST00000542142 GUCY2FP51841 1108 aa16.95■□□□□ 0.3
MMP17-208ENST00000542142 KCNB1Q14721 858 aa16.95■□□□□ 0.3
MMP17-208ENST00000542142 TMEM130Q8N3G9 435 aa16.95■□□□□ 0.3
MMP17-208ENST00000542142 GOLGA5Q8TBA6 731 aa16.95■□□□□ 0.3
MMP17-208ENST00000542142 NOC3LQ8WTT2 800 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms