RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 CD99L2Q8TCZ2 262 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 CTNNBL1Q8WYA6 563 aaPredicted RBP21.82■■□□□ 1.08
CDH5-202ENST00000539168 OSMRQ99650 979 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 SEPT11Q9NVA2 429 aaKnown RBP21.82■■□□□ 1.08
CDH5-202ENST00000539168 SAGE1Q9NXZ1 904 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 GINS2Q9Y248 185 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 ANKRD62A6NC57 917 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 KRT5P13647 590 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 PRLRP16471 622 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 ATICP31939 592 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 CDR2Q01850 454 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 RPAINQ86UA6 219 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 CDR2LQ86X02 465 aaPredicted RBP21.82■■□□□ 1.08
CDH5-202ENST00000539168 RPUSD2Q8IZ73 545 aaKnown RBP21.82■■□□□ 1.08
CDH5-202ENST00000539168 UBE2Q2Q8WVN8 375 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 NIF3L1Q9GZT8 377 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 FAM124BQ9H5Z6 455 aaPredicted RBP21.82■■□□□ 1.08
CDH5-202ENST00000539168 NOCTQ9UK39 431 aaKnown RBP21.82■■□□□ 1.08
CDH5-202ENST00000539168 CNTN6Q9UQ52 1028 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 PCDHGC5Q9Y5F6 944 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 SAR1BQ9Y6B6 198 aa21.82■■□□□ 1.08
CDH5-202ENST00000539168 LACTBL1A8MY62 500 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 RTN2O75298 545 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 MOCS3O95396 460 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 SGPL1O95470 568 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 YARSP54577 528 aaKnown RBP21.81■■□□□ 1.08
CDH5-202ENST00000539168 TMEM62Q0P6H9 643 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 HIC1Q14526 733 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 NBPF20Q3BBV1 942 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 CXCL17Q6UXB2 119 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 RNF180Q86T96 592 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 EFCAB13Q8IY85 973 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 OLIG1Q8TAK6 271 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 ISCUQ9H1K1 167 aa21.81■■□□□ 1.08
CDH5-202ENST00000539168 FKTNO75072 461 aa21.8■■□□□ 1.08
CDH5-202ENST00000539168 CLSTN1O94985 981 aa21.8■■□□□ 1.08
CDH5-202ENST00000539168 HOXA11P31270 313 aaPredicted RBP21.8■■□□□ 1.08
CDH5-202ENST00000539168 VEGFBP49765 207 aa21.8■■□□□ 1.08
CDH5-202ENST00000539168 PTPN11Q06124 597 aaPredicted RBP21.8■■□□□ 1.08
CDH5-202ENST00000539168 NOP9Q86U38 636 aaKnown RBP21.8■■□□□ 1.08
CDH5-202ENST00000539168 ZNF784Q8NCA9 323 aaPredicted RBP21.8■■□□□ 1.08
CDH5-202ENST00000539168 CELF4Q9BZC1 486 aaKnown RBP21.8■■□□□ 1.08
CDH5-202ENST00000539168 APOBEC3GQ9HC16 384 aaKnown RBP21.8■■□□□ 1.08
CDH5-202ENST00000539168 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.8■■□□□ 1.08
CDH5-202ENST00000539168 DDX20Q9UHI6 824 aaKnown RBP21.8■■□□□ 1.08
CDH5-202ENST00000539168 CAPN6Q9Y6Q1 641 aa21.8■■□□□ 1.08
CDH5-202ENST00000539168 ANK1P16157 1881 aa21.8■■□□□ 1.08
CDH5-202ENST00000539168 P4HA1P13674 534 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 ELNP15502 786 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 CCND3P30281 292 aaPredicted RBP21.79■■□□□ 1.08
CDH5-202ENST00000539168 GALCP54803 685 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 AMPD2Q01433 879 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 TRIM32Q13049 653 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 TMEM132DQ14C87 1099 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 ZNF699Q32M78 642 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 SLC10A6Q3KNW5 377 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 TRIM72Q6ZMU5 477 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 SLC47A2Q86VL8 602 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 RHOT2Q8IXI1 618 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 SYCE1Q8N0S2 351 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 SLAIN1Q8ND83 568 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 PACSIN1Q9BY11 444 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 TRIM6Q9C030 488 aaPredicted RBP21.79■■□□□ 1.08
CDH5-202ENST00000539168 VRTNQ9H8Y1 702 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 ITGA11Q9UKX5 1188 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 NUB1Q9Y5A7 615 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 PCDHB4Q9Y5E5 795 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 NCANO14594 1321 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 EFCAB8A8MWE9 144 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 NPTXRO95502 500 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 CST3P01034 146 aaPredicted RBP21.79■■□□□ 1.08
CDH5-202ENST00000539168 ASGR1P07306 291 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 ACO1P21399 889 aaKnown RBP21.79■■□□□ 1.08
CDH5-202ENST00000539168 MYL6P60660 151 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 MRPS6P82932 125 aaKnown RBP21.79■■□□□ 1.08
CDH5-202ENST00000539168 ZNF200P98182 395 aaPredicted RBP21.79■■□□□ 1.08
CDH5-202ENST00000539168 TCEAL1Q15170 157 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 SLC20A1Q8WUM9 679 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 RFFLQ8WZ73 363 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 TRPV2Q9Y5S1 764 aa21.79■■□□□ 1.08
CDH5-202ENST00000539168 STAU1O95793 577 aaKnown RBP21.78■■□□□ 1.08
CDH5-202ENST00000539168 TCP1P17987 556 aaKnown RBP21.78■■□□□ 1.08
CDH5-202ENST00000539168 YY1P25490 414 aa21.78■■□□□ 1.08
CDH5-202ENST00000539168 NOP2P46087 812 aaKnown RBP21.78■■□□□ 1.08
CDH5-202ENST00000539168 CKAP4Q07065 602 aaKnown RBP21.78■■□□□ 1.08
CDH5-202ENST00000539168 KCNA10Q16322 511 aa21.78■■□□□ 1.08
CDH5-202ENST00000539168 JADE1Q6IE81 842 aa21.78■■□□□ 1.08
CDH5-202ENST00000539168 SPOPLQ6IQ16 392 aa21.78■■□□□ 1.08
CDH5-202ENST00000539168 CCSAPQ6IQ19 270 aaPredicted RBP21.78■■□□□ 1.08
CDH5-202ENST00000539168 TMEM192Q8IY95 271 aa21.78■■□□□ 1.08
CDH5-202ENST00000539168 TTC39CQ8N584 583 aa21.78■■□□□ 1.08
CDH5-202ENST00000539168 CDHR5Q9HBB8 845 aa21.78■■□□□ 1.08
CDH5-202ENST00000539168 BUB1O43683 1085 aa21.77■■□□□ 1.08
CDH5-202ENST00000539168 NFICP08651 508 aa21.77■■□□□ 1.08
CDH5-202ENST00000539168 CHRNB2P17787 502 aa21.77■■□□□ 1.08
CDH5-202ENST00000539168 FMO1Q01740 532 aa21.77■■□□□ 1.08
CDH5-202ENST00000539168 ZNF667Q5HYK9 610 aa21.77■■□□□ 1.08
CDH5-202ENST00000539168 SERINC5Q86VE9 423 aa21.77■■□□□ 1.08
CDH5-202ENST00000539168 RPGRIP1Q96KN7 1286 aa21.77■■□□□ 1.08
CDH5-202ENST00000539168 CARD6Q9BX69 1037 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms