RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 POLD4Q9HCU8 107 aa15.41■□□□□ 0.06
SMARCA4-206ENST00000538456 TUFT1Q9NNX1 390 aa15.41■□□□□ 0.06
SMARCA4-206ENST00000538456 RALGAPA1Q6GYQ0 2036 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 WDR27A2RRH5 827 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 NRG2O14511 850 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 EPB41L2O43491 1005 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 MCM7P33993 719 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 SOX4Q06945 474 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 SPEM2Q0P670 501 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 ATF7IP2Q5U623 682 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 DIS3L2Q8IYB7 885 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 ZNF461Q8TAF7 563 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 UROC1Q96N76 676 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 NACC1Q96RE7 527 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 FAM126AQ9BYI3 521 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 CYP4F11Q9HBI6 524 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 ZFP14Q9HCL3 533 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 AVENQ9NQS1 362 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 RAB23Q9ULC3 237 aa15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 PDCD11Q14690 1871 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-206ENST00000538456 CITO14578 2027 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 SMIM28A0A1B0GU29 152 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 ARHGEF37A1IGU5 675 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 SEC24AO95486 1093 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 CYP11B2P19099 503 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 TGM1P22735 817 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 CCR2P41597 374 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 OSTNP61366 133 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 PPP2R5AQ15172 486 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 PRSS36Q5K4E3 855 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 NT5DC1Q5TFE4 455 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 SLC8B1Q6J4K2 584 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 PRR23BQ6ZRT6 265 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 PDZD4Q76G19 769 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 ZNF687Q8N1G0 1237 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 CEP120Q8N960 986 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 RTKNQ9BST9 563 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 TRMT61BQ9BVS5 477 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 CHRDQ9H2X0 955 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 INSL5Q9Y5Q6 135 aa15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-206ENST00000538456 MAN2B1O00754 1011 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 ABLIM3O94929 683 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 TDGF1P13385 188 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 GDI1P31150 447 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 YARSP54577 528 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 TRIM29Q14134 588 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 PPP2R5DQ14738 602 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 FAM3CQ92520 227 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 IFT74Q96LB3 600 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 ZSWIM3Q96MP5 696 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 ASB16Q96NS5 453 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 POLR3CQ9BUI4 534 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 PIAS3Q9Y6X2 628 aa15.38■□□□□ 0.05
SMARCA4-206ENST00000538456 ZFHX4Q86UP3 3567 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 PODXLO00592 558 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 ZNF197O14709 1029 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 LARGE1O95461 756 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 ATF2P15336 505 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 VIPR2P41587 438 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 EFNA5P52803 228 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 NRLP54845 237 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 ZNF568Q3ZCX4 644 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 CYP4A22Q5TCH4 519 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 LAIR1Q6GTX8 287 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 VITQ6UXI7 678 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 APBB1IPQ7Z5R6 666 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 TCEAL8Q8IYN2 117 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 HS6ST3Q8IZP7 471 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 ERMNQ8TAM6 284 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 IRF7Q92985 503 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 CCDC94Q9BW85 323 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 LMAN1LQ9HAT1 526 aa15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 ZNF334Q9HCZ1 680 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 TOPORSQ9NS56 1045 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-206ENST00000538456 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 JAK2O60674 1132 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 MYL4P12829 197 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 GJA1P17302 382 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 PSMC3P17980 439 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 RPA1P27694 616 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 CCR3P51677 355 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 SATB1Q01826 763 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 ANKRD1Q15327 319 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 ME3Q16798 604 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 CTXN3Q4LDR2 81 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 IQCEQ6IPM2 695 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 MAP4K3Q8IVH8 894 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 ELMOD1Q8N336 334 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 SMARCD2Q92925 531 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 GTF3C6Q969F1 213 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 ZMAT2Q96NC0 199 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 CDT1Q9H211 546 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 SLC38A7Q9NVC3 462 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 FBXL5Q9UKA1 691 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 NUB1Q9Y5A7 615 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 NCANO14594 1321 aa15.36■□□□□ 0.05
SMARCA4-206ENST00000538456 CCDC169A6NNP5 214 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 H7C4K7 107 aa15.35■□□□□ 0.05
SMARCA4-206ENST00000538456 K7ERI5 159 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms