RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 CD302Q8IX05 232 aa9.85□□□□□ -0.83
NR1I3-230ENST00000511944 TXLNBQ8N3L3 684 aa9.85□□□□□ -0.83
NR1I3-230ENST00000511944 ARRDC4Q8NCT1 418 aa9.85□□□□□ -0.83
NR1I3-230ENST00000511944 FDXACB1Q9BRP7 624 aaPredicted RBP9.85□□□□□ -0.83
NR1I3-230ENST00000511944 ADPGKQ9BRR6 497 aa9.85□□□□□ -0.83
NR1I3-230ENST00000511944 PPP1R12CQ9BZL4 782 aa9.85□□□□□ -0.83
NR1I3-230ENST00000511944 PCIF1Q9H4Z3 704 aa9.85□□□□□ -0.83
NR1I3-230ENST00000511944 FAM124BQ9H5Z6 455 aaPredicted RBP9.85□□□□□ -0.83
NR1I3-230ENST00000511944 RBAKQ9NYW8 714 aaPredicted RBP9.85□□□□□ -0.83
NR1I3-230ENST00000511944 AIPL1Q9NZN9 384 aa9.85□□□□□ -0.83
NR1I3-230ENST00000511944 GCNT4Q9P109 453 aa9.85□□□□□ -0.83
NR1I3-230ENST00000511944 BZW2Q9Y6E2 419 aaKnown RBP9.85□□□□□ -0.83
NR1I3-230ENST00000511944 SQORQ9Y6N5 450 aa9.85□□□□□ -0.83
NR1I3-230ENST00000511944 ATP8B3O60423 1300 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 A0A1B0GUA9 196 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 TISP43B9A030 160 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 M0QZ92 97 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 KIF2AO00139 706 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 B4GALT4O60513 344 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 NOL4O94818 638 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 INHAP05111 366 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 ASGR1P07306 291 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 CLTAP09496 248 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 UCHL3P15374 230 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 EIF4BP23588 611 aaKnown RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 CCND3P30281 292 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 ADKP55263 362 aaKnown RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 NLRP11P59045 1033 aaKnown RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 BEX3Q00994 111 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 LRMPQ12912 555 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 ZNF568Q3ZCX4 644 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 ZACNQ401N2 412 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 C1orf220Q5T0J3 134 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 KLHDC7AQ5VTJ3 777 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 DPY19L2P1Q6NXN4 242 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 PDXDC1Q6P996 788 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 CRELD2Q6UXH1 353 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 C15orf39Q6ZRI6 1047 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 WDR49Q8IV35 697 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 FBXL13Q8NEE6 735 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 LENG1Q96BZ8 264 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 SCLT1Q96NL6 688 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 FNBP1Q96RU3 617 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 CGRRF1Q99675 332 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 FAM213AQ9BRX8 229 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 LSM14BQ9BX40 385 aaKnown RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 IKZF4Q9H2S9 585 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 ASB7Q9H672 318 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 FAM207AQ9NSI2 230 aaPredicted RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 HDAC6Q9UBN7 1215 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 APEX2Q9UBZ4 518 aa9.84□□□□□ -0.83
NR1I3-230ENST00000511944 CPSF3Q9UKF6 684 aaKnown RBP9.84□□□□□ -0.83
NR1I3-230ENST00000511944 MYADML2A6NDP7 307 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 LRRIQ3A6PVS8 624 aaPredicted RBP9.83□□□□□ -0.84
NR1I3-230ENST00000511944 ATP9BO43861 1147 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 TSPAN1O60635 241 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 PGK1P00558 417 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 VTNP04004 478 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 CYLC1P35663 651 aaPredicted RBP9.83□□□□□ -0.84
NR1I3-230ENST00000511944 PRKCIP41743 596 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 ACLYP53396 1101 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 PPP3CAQ08209 521 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 PTK7Q13308 1070 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 NCOA4Q13772 614 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 KCNA10Q16322 511 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 CBWD6Q4V339 395 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 CBWD3Q5JTY5 395 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 CBWD5Q5RIA9 395 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 NOTUMQ6P988 496 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 SLC27A1Q6PCB7 646 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 ZNF662Q6ZS27 426 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 USP38Q8NB14 1042 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 SLC43A3Q8NBI5 491 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 LMO3Q8TAP4 145 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 PLEKHO2Q8TD55 490 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 DHX38Q92620 1227 aaKnown RBP9.83□□□□□ -0.84
NR1I3-230ENST00000511944 SAAL1Q96ER3 474 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 GLT1D1Q96MS3 346 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 TCHPQ9BT92 498 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 STK33Q9BYT3 514 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 TMEM117Q9H0C3 514 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 INTS2Q9H0H0 1204 aaKnown RBP9.83□□□□□ -0.84
NR1I3-230ENST00000511944 CDT1Q9H211 546 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 PDZD7Q9H5P4 517 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 MINDY3Q9H8M7 445 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 PLEKHA5Q9HAU0 1116 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 SIX2Q9NPC8 291 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 ATP13A2Q9NQ11 1180 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 ANKFY1Q9P2R3 1169 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 PYCARDQ9ULZ3 195 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 DERAQ9Y315 318 aa9.83□□□□□ -0.84
NR1I3-230ENST00000511944 TREHO43280 583 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 IPO7O95373 1038 aaKnown RBP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 STAU1O95793 577 aaKnown RBP9.82□□□□□ -0.84
NR1I3-230ENST00000511944 SERPING1P05155 500 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 EDN1P05305 212 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 CCDC175P0C221 793 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 TRIM49P0CI25 452 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 TRIM49CP0CI26 452 aa9.82□□□□□ -0.84
NR1I3-230ENST00000511944 ARF4P18085 180 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms