RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 TRIM49P0CI25 452 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 TRIM49CP0CI26 452 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 PLS3P13797 630 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 VCLP18206 1134 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 NR4A1P22736 598 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 STAT3P40763 770 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 TBL3Q12788 808 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 MOGSQ13724 837 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 UBAP2LQ14157 1087 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 PDK3Q15120 406 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC35G1Q2M3R5 365 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 GLIS1Q8NBF1 620 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC30A5Q8TAD4 765 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 PNMA5Q96PV4 448 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 HAPLN3Q96S86 360 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 MECRQ9BV79 373 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 MAK16Q9BXY0 300 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 FAM192AQ9GZU8 254 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC52A2Q9HAB3 445 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 PCDH18Q9HCL0 1135 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 STX18Q9P2W9 335 aaKnown RBP7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 USP31Q70CQ4 1352 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 ARAP3Q8WWN8 1544 aa7.69□□□□□ -1.18
LIMCH1-207ENST00000508466 HTR3EA5X5Y0 456 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 TP73O15350 636 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 TBC1D12O60347 775 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 ZBTB11O95625 1053 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 OXSR1O95747 527 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC5A2P31639 672 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 COILP38432 576 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 YARSP54577 528 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 EMP3P54852 163 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 CABP4P57796 275 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 PABPC4Q13310 644 aaKnown RBP eCLIP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 UBE3CQ15386 1083 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 CTC1Q2NKJ3 1217 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 CCDC152Q4G0S7 254 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 RABGAP1LQ5R372 815 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 KAZNQ674X7 775 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 AMIGO2Q86SJ2 522 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 DGKHQ86XP1 1220 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 USP33Q8TEY7 942 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 LARP4BQ92615 738 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 KCNN1Q92952 543 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 COA7Q96BR5 231 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 NSL1Q96IY1 281 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 CATSPER2Q96P56 530 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 HEPHQ9BQS7 1158 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 TMEM120AQ9BXJ8 343 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 NDEL1Q9GZM8 345 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 STMN4Q9H169 189 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 GANQ9H2C0 597 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 SAYSD1Q9NPB0 183 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 XPNPEP1Q9NQW7 623 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 GCNT4Q9P109 453 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 ANAPC5Q9UJX4 755 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 TRIM17Q9Y577 477 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 E5RJQ4 531 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 J3QRK9 145 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 ADCY6O43306 1168 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 EDF1O60869 148 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 E2F6O75461 281 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 DCTN3O75935 186 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 TTC4O95801 387 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 CLPTM1O96005 669 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 PENKP01210 267 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 OR52Z1P0C646 297 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 MYL2P10916 166 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 CD1EP15812 388 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 VCAM1P19320 739 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 RRM1P23921 792 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 CIITAP33076 1130 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 GYG1P46976 350 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 NAPAP54920 295 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 EIF6P56537 245 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 ARHGAP4P98171 946 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 COASYQ13057 564 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 MSLNQ13421 630 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 CYLC2Q14093 348 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 FASTKD5Q7L8L6 764 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 PTAR1Q7Z6K3 402 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 SNX29P2Q8IUI4 249 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 LRRC43Q8N309 656 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 RASGEF1CQ8N431 466 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 Q8N9G6 341 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 GDPD5Q8WTR4 605 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 C17orf50Q8WW18 174 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 FBXL8Q96CD0 374 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 ACSF2Q96CM8 615 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 IQCDQ96DY2 449 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 ZNF512Q96ME7 567 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 MMP19Q99542 508 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 WDR70Q9NW82 654 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 TRNAU1APQ9NX07 287 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 SLC7A8Q9UHI5 535 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 KIAA1024Q9UPX6 916 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 KAT6BQ8WYB5 2073 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 WDR19Q8NEZ3 1342 aa7.68□□□□□ -1.18
LIMCH1-207ENST00000508466 ABLIM1O14639 778 aa7.67□□□□□ -1.18
LIMCH1-207ENST00000508466 P4HA2O15460 535 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms