RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 BMP6P22004 513 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 PSMC2P35998 433 aaKnown RBP17.31■□□□□ 0.36
SSBP1-214ENST00000498107 CLCNKBP51801 687 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 TFAMQ00059 246 aaKnown RBP17.31■□□□□ 0.36
SSBP1-214ENST00000498107 SOX4Q06945 474 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-214ENST00000498107 PAK1Q13153 545 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 SKOR2Q2VWA4 1001 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-214ENST00000498107 KLHL10Q6JEL2 608 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 RBM43Q6ZSC3 357 aaKnown RBP17.31■□□□□ 0.36
SSBP1-214ENST00000498107 WDR49Q8IV35 697 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 MICAL1Q8TDZ2 1067 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 NELFBQ8WX92 580 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 C18orf25Q96B23 403 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-214ENST00000498107 ANKRD36BP1Q96IX9 119 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 MKNK1Q9BUB5 465 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 PDE11AQ9HCR9 933 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 MARCH5Q9NX47 278 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 TUBGCP4Q9UGJ1 667 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 SSX2IPQ9Y2D8 614 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 R3HCC1Q9Y3T6 440 aaKnown RBP17.31■□□□□ 0.36
SSBP1-214ENST00000498107 NUB1Q9Y5A7 615 aa17.31■□□□□ 0.36
SSBP1-214ENST00000498107 TNNC2P02585 160 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 SOD2P04179 222 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
SSBP1-214ENST00000498107 AP3M2P53677 418 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 NLRP12P59046 1061 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 ENPEPQ07075 957 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 DUOXA2Q1HG44 320 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 KLHL40Q2TBA0 621 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 CT47A1Q5JQC4 288 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-214ENST00000498107 ANKRD40Q6AI12 368 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 FUT10Q6P4F1 479 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 INTS8Q75QN2 995 aaKnown RBP17.3■□□□□ 0.36
SSBP1-214ENST00000498107 TMC7Q7Z402 723 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 TMEM173Q86WV6 379 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-214ENST00000498107 VPS52Q8N1B4 723 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 PAAF1Q9BRP4 392 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 GOLGA2P5Q9HBQ8 144 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 ENTPD7Q9NQZ7 604 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 DPP3Q9NY33 737 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 MTCH2Q9Y6C9 303 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 PLXNA4Q9HCM2 1894 aa17.3■□□□□ 0.36
SSBP1-214ENST00000498107 KIF4AO95239 1232 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 FGFR1OPO95684 399 aaKnown RBP17.29■□□□□ 0.36
SSBP1-214ENST00000498107 DLATP10515 647 aaKnown RBP17.29■□□□□ 0.36
SSBP1-214ENST00000498107 EPB41P11171 864 aaKnown RBP17.29■□□□□ 0.36
SSBP1-214ENST00000498107 KRT13P13646 458 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 TNNI1P19237 187 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 ADGRE1Q14246 886 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 SMC1AQ14683 1233 aaKnown RBP17.29■□□□□ 0.36
SSBP1-214ENST00000498107 USP41Q3LFD5 358 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 KIAA1841Q6NSI8 718 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 SASS6Q6UVJ0 657 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 EFCAB13Q8IY85 973 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 GPR65Q8IYL9 337 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 FAM186BQ8IYM0 893 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 TMC2Q8TDI7 906 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 BCL7CQ8WUZ0 217 aaPredicted RBP17.29■□□□□ 0.36
SSBP1-214ENST00000498107 CCDC127Q96BQ5 260 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 CEP63Q96MT8 703 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 CGRRF1Q99675 332 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 TCF25Q9BQ70 676 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 HERC2P3Q9BVR0 1158 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 INTS13Q9NVM9 706 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 RWDD2AQ9UIY3 292 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 ITGA11Q9UKX5 1188 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 CTNND2Q9UQB3 1225 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 CHD7Q9P2D1 2997 aa17.29■□□□□ 0.36
SSBP1-214ENST00000498107 ARHGEF37A1IGU5 675 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 FSD2A1L4K1 749 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 SLC16A3O15427 465 aaKnown RBP17.28■□□□□ 0.36
SSBP1-214ENST00000498107 LETM1O95202 739 aaPredicted RBP17.28■□□□□ 0.36
SSBP1-214ENST00000498107 URODP06132 367 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 CTSAP10619 480 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 DNAJB1P25685 340 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 PNPLA4P41247 253 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 CASP4P49662 377 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 C9orf57Q5W0N0 161 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 PDXDC1Q6P996 788 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 ZC3H3Q8IXZ2 948 aaKnown RBP17.28■□□□□ 0.36
SSBP1-214ENST00000498107 RABGGTAQ92696 567 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 ZNF560Q96MR9 790 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 ZBP1Q9H171 429 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 NSUN3Q9H649 340 aaKnown RBP17.28■□□□□ 0.36
SSBP1-214ENST00000498107 STXBP5LQ9Y2K9 1186 aa17.28■□□□□ 0.36
SSBP1-214ENST00000498107 PRRC2BQ5JSZ5 2229 aaKnown RBP17.27■□□□□ 0.36
SSBP1-214ENST00000498107 TRANK1O15050 2925 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 ANO9A1A5B4 782 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 TRIM49BA6NDI0 452 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 IKBKBO14920 756 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 FSCN2O14926 492 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 AKAP3O75969 853 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 EFEMP2O95967 443 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 ERCC5P28715 1186 aaPredicted RBP17.27■□□□□ 0.36
SSBP1-214ENST00000498107 GLUD2P49448 558 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 PMS1P54277 932 aaKnown RBP17.27■□□□□ 0.36
SSBP1-214ENST00000498107 ERVFC1P60507 584 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 RBP5P82980 135 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 CREMQ03060 361 aa17.27■□□□□ 0.36
SSBP1-214ENST00000498107 CAMK1Q14012 370 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms