RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 SCAPQ12770 1279 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 DACT2Q5SW24 774 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 DPY19L2P1Q6NXN4 242 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 RHOT1Q8IXI2 618 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 ZGPATQ8N5A5 531 aaKnown RBP4.5□□□□□ -1.69
NF1-213ENST00000489712 FITM2Q8N6M3 262 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 NUP133Q8WUM0 1156 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 DPF2Q92785 391 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 FUBP1Q96AE4 644 aaKnown RBP4.5□□□□□ -1.69
NF1-213ENST00000489712 C11orf54Q9H0W9 315 aaPredicted RBP4.5□□□□□ -1.69
NF1-213ENST00000489712 TDP1Q9NUW8 608 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 USP25Q9UHP3 1055 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 INTUQ9ULD6 942 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 AATKQ6ZMQ8 1374 aa4.5□□□□□ -1.69
NF1-213ENST00000489712 KIAA0355O15063 1070 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 NDUFS2O75306 463 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 ESRRBO95718 433 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 CKBP12277 381 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 CXCR5P32302 372 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 ATP8B2P98198 1209 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 CDC42EP1Q00587 391 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 FOXI1Q12951 378 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 ACAP2Q15057 778 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 PGM2L1Q6PCE3 622 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 GPR149Q86SP6 731 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 RSPH3Q86UC2 560 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 ADGRG3Q86Y34 549 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 CBARPQ8N350 705 aaPredicted RBP4.49□□□□□ -1.69
NF1-213ENST00000489712 C1orf162Q8NEQ5 155 aaPredicted RBP4.49□□□□□ -1.69
NF1-213ENST00000489712 NLGN4YQ8NFZ3 816 aaPredicted RBP4.49□□□□□ -1.69
NF1-213ENST00000489712 HDAC10Q969S8 669 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 BOD1Q96IK1 185 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 TMX3Q96JJ7 454 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 Q96MF0 132 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 PNKPQ96T60 521 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 KRTAP17-1Q9BYP8 105 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 TMEM74BQ9NUR3 256 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 INSL6Q9Y581 213 aa4.49□□□□□ -1.69
NF1-213ENST00000489712 MAST3O60307 1309 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 TCRBV7S2A1N4TA0A589 114 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 XPOTO43592 962 aaKnown RBP4.48□□□□□ -1.69
NF1-213ENST00000489712 SGTAO43765 313 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 PRSS23O95084 383 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 FBLP22087 321 aaKnown RBP4.48□□□□□ -1.69
NF1-213ENST00000489712 VAV2P52735 878 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 CTXN1P60606 82 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 CYP2A13Q16696 494 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 INAVAQ3KP66 663 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 PRR16Q569H4 304 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 SYDE2Q5VT97 1194 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 Q6ZNX1 250 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 COLGALT2Q8IYK4 626 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 TBC1D15Q8TC07 691 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 JADE3Q92613 823 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 MTMR8Q96EF0 704 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 MED15Q96RN5 788 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 GSTO2Q9H4Y5 243 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 CASS4Q9NQ75 786 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 PTGFRNQ9P2B2 879 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 TUBD1Q9UJT1 453 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 TRHDEQ9UKU6 1024 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 MRFAP1Q9Y605 127 aa4.48□□□□□ -1.69
NF1-213ENST00000489712 CCDC78A2IDD5 438 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 MYBL2P10244 700 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 MTHFD1P11586 935 aaKnown RBP4.47□□□□□ -1.69
NF1-213ENST00000489712 FCER1AP12319 257 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 C5AR1P21730 350 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 CLK3P49761 638 aaKnown RBP4.47□□□□□ -1.69
NF1-213ENST00000489712 NOMO3P69849 1222 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 KRT85P78386 507 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 TARDBPQ13148 414 aaKnown RBP eCLIP4.47□□□□□ -1.69
NF1-213ENST00000489712 GEN1Q17RS7 908 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 ABCB5Q2M3G0 1257 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 NOMO2Q5JPE7 1267 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 RD3Q7Z3Z2 195 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 DCBLD1Q8N8Z6 715 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 RAB24Q969Q5 203 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 MARS2Q96GW9 593 aaKnown RBP4.47□□□□□ -1.69
NF1-213ENST00000489712 ZNF764Q96H86 408 aaPredicted RBP4.47□□□□□ -1.69
NF1-213ENST00000489712 BBC3Q96PG8 261 aaPredicted RBP4.47□□□□□ -1.69
NF1-213ENST00000489712 PACSIN1Q9BY11 444 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 UNKLQ9H9P5 680 aaKnown RBP4.47□□□□□ -1.69
NF1-213ENST00000489712 DMTF1Q9Y222 760 aa4.47□□□□□ -1.69
NF1-213ENST00000489712 SHTN1A0MZ66 631 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 KLHL33A6NCF5 533 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 MYADML2A6NDP7 307 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 GRM6O15303 877 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 CD1AP06126 327 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 MPLP40238 635 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 GUCY2FP51841 1108 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 MRPS35P82673 323 aaKnown RBP4.46□□□□□ -1.7
NF1-213ENST00000489712 SLFN5Q08AF3 891 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 MTMR1Q13613 665 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 RAB39AQ14964 217 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 PABPC1LQ4VXU2 614 aaKnown RBP4.46□□□□□ -1.7
NF1-213ENST00000489712 PPP4R3AQ6IN85 833 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 GADL1Q6ZQY3 521 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 CAGE1Q8TC20 777 aa4.46□□□□□ -1.7
NF1-213ENST00000489712 NACC2Q96BF6 587 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms