RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SHROOM3Q8TF72 1996 aa16.91■□□□□ 0.3
U2AF1-211ENST00000486519 TENM4Q6N022 2769 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 CCDC163A0A0D9SF12 145 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 C1QL1O75973 258 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 MYL4P12829 197 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 GSPT1P15170 499 aaKnown RBP16.9■□□□□ 0.3
U2AF1-211ENST00000486519 CDC27P30260 824 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 MCM5P33992 734 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 PTENP60484 403 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 STXBP5Q5T5C0 1151 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 APOA5Q6Q788 366 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 CHD1LQ86WJ1 897 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 TMTC2Q8N394 836 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 SHKBP1Q8TBC3 707 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 CHFRQ96EP1 664 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 LRIG1Q96JA1 1093 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 MTA3Q9BTC8 594 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 TRIM6Q9C030 488 aaPredicted RBP16.9■□□□□ 0.3
U2AF1-211ENST00000486519 CEP72Q9P209 647 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 RBM8AQ9Y5S9 174 aaKnown RBP16.9■□□□□ 0.3
U2AF1-211ENST00000486519 PTPRDP23468 1912 aa16.9■□□□□ 0.3
U2AF1-211ENST00000486519 INO80B-WBP1J3KQ70 363 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 ZBTB39O15060 712 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 CHADO15335 359 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 MEFVO15553 781 aaPredicted RBP16.89■□□□□ 0.29
U2AF1-211ENST00000486519 AKAP3O75969 853 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 SEC24BO95487 1268 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 PRKCBP05771 671 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 AXLP30530 894 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 SIM1P81133 766 aaPredicted RBP16.89■□□□□ 0.29
U2AF1-211ENST00000486519 SPIRE1Q08AE8 756 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 RALGPS2Q86X27 583 aaPredicted RBP16.89■□□□□ 0.29
U2AF1-211ENST00000486519 REXO1Q8N1G1 1221 aaKnown RBP16.89■□□□□ 0.29
U2AF1-211ENST00000486519 C3orf58Q8NDZ4 430 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 CCDC51Q96ER9 411 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 ZMYND12Q9H0C1 365 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 INSL5Q9Y5Q6 135 aa16.89■□□□□ 0.29
U2AF1-211ENST00000486519 ASXL3Q9C0F0 2248 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 TTLL13PA6NNM8 815 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 hCG_1984214I3L0E3 225 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 PRRG1O14668 218 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 MICAL2O94851 1124 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 ABLIM3O94929 683 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 BRCC3P46736 316 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 FCHO2Q0JRZ9 810 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 RTN1Q16799 776 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 FSTL4Q6MZW2 842 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 SMC5Q8IY18 1101 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 ZNF713Q8N859 430 aaPredicted RBP16.88■□□□□ 0.29
U2AF1-211ENST00000486519 RDM1Q8NG50 284 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 ASAP3Q8TDY4 903 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 SLC7A3Q8WY07 619 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 MSANTD3Q96H12 275 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 CEP170P1Q96L14 293 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 TCEANC2Q96MN5 208 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 GLT8D2Q9H1C3 349 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 XPNPEP1Q9NQW7 623 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 BACE2Q9Y5Z0 518 aa16.88■□□□□ 0.29
U2AF1-211ENST00000486519 FAM221BA6H8Z2 402 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 ZNF197O14709 1029 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 KHNYNO15037 678 aaKnown RBP16.87■□□□□ 0.29
U2AF1-211ENST00000486519 TDP2O95551 362 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 CHMLP26374 656 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 ARPP19P56211 112 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 PSMC5P62195 406 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 EMC2Q15006 297 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 PFKFB3Q16875 520 aaPredicted RBP16.87■□□□□ 0.29
U2AF1-211ENST00000486519 NAIF1Q69YI7 327 aaPredicted RBP16.87■□□□□ 0.29
U2AF1-211ENST00000486519 RTL10Q7L3V2 364 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 ZNF461Q8TAF7 563 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 JPH2Q9BR39 696 aaPredicted RBP16.87■□□□□ 0.29
U2AF1-211ENST00000486519 MKNK1Q9BUB5 465 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 CYP4F11Q9HBI6 524 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 SLC8A2Q9UPR5 921 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 PI4KAP42356 2102 aa16.87■□□□□ 0.29
U2AF1-211ENST00000486519 APC2O95996 2303 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 PTPRBP23467 1997 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 ESYT2A0FGR8 921 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 BCKDHBP21953 392 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
U2AF1-211ENST00000486519 NUCB1Q02818 461 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 CAPSQ13938 189 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 ELF2Q15723 593 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 PDXDC1Q6P996 788 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 PIP4P1Q86T03 277 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 YAF2Q8IY57 180 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 GLIS3Q8NEA6 775 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 MDM1Q8TC05 714 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 GOLGA2P5Q9HBQ8 144 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 FBRSL1Q9HCM7 1045 aaKnown RBP16.86■□□□□ 0.29
U2AF1-211ENST00000486519 FSCN3Q9NQT6 498 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 RBM28Q9NW13 759 aaKnown RBP16.86■□□□□ 0.29
U2AF1-211ENST00000486519 USP20Q9Y2K6 914 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 RAXQ9Y2V3 346 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 ZMYM2Q9UBW7 1377 aa16.86■□□□□ 0.29
U2AF1-211ENST00000486519 TBX3O15119 743 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 EGFP01133 1207 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 MAPK8P45983 427 aa16.85■□□□□ 0.29
U2AF1-211ENST00000486519 CLCNKBP51801 687 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms