RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 VPS16Q9H269 839 aa14.39□□□□□ -0.11
BRAT1-205ENST00000473879 PDZD7Q9H5P4 517 aa14.39□□□□□ -0.11
BRAT1-205ENST00000473879 RSAD1Q9HA92 442 aa14.39□□□□□ -0.11
BRAT1-205ENST00000473879 ANKFY1Q9P2R3 1169 aa14.39□□□□□ -0.11
BRAT1-205ENST00000473879 IPPQ9Y573 584 aa14.39□□□□□ -0.11
BRAT1-205ENST00000473879 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.39□□□□□ -0.11
BRAT1-205ENST00000473879 LGALS16A8MUM7 142 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 GOLGA6L6A8MZA4 724 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 EXTL3O43909 919 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 BMP1P13497 986 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 ITGA4P13612 1032 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 ADSSP30520 456 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 IRS1P35568 1242 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 ALDH7A1P49419 539 aaKnown RBP14.38□□□□□ -0.11
BRAT1-205ENST00000473879 CASP4P49662 377 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 BCAR1P56945 870 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 KRT17Q04695 432 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 HYAL1Q12794 435 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 NOLC1Q14978 699 aaKnown RBP eCLIP14.38□□□□□ -0.11
BRAT1-205ENST00000473879 ZNF568Q3ZCX4 644 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 VWA3BQ502W6 1294 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 FKBP15Q5T1M5 1219 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 SLC27A1Q6PCB7 646 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 DRC7Q8IY82 874 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 SLC39A11Q8N1S5 342 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 URGCPQ8TCY9 931 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 PPP2R3CQ969Q6 453 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 NAP1L5Q96NT1 182 aaPredicted RBP14.38□□□□□ -0.11
BRAT1-205ENST00000473879 ADPGKQ9BRR6 497 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 TCHPQ9BT92 498 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 MSTO1Q9BUK6 570 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 RTN4Q9NQC3 1192 aaKnown RBP14.38□□□□□ -0.11
BRAT1-205ENST00000473879 TLR9Q9NR96 1032 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 TBC1D13Q9NVG8 400 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 SPG21Q9NZD8 308 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 KANSL3Q9P2N6 904 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 PUF60Q9UHX1 559 aaKnown RBP14.38□□□□□ -0.11
BRAT1-205ENST00000473879 AGO2Q9UKV8 859 aaKnown RBP14.38□□□□□ -0.11
BRAT1-205ENST00000473879 TNFSF13BQ9Y275 285 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 INPP5FQ9Y2H2 1132 aa14.38□□□□□ -0.11
BRAT1-205ENST00000473879 BRWD1Q9NSI6 2320 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 A0A0B4J269 797 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 FSCN2O14926 492 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 RNASELQ05823 741 aaKnown RBP14.37□□□□□ -0.11
BRAT1-205ENST00000473879 ENPEPQ07075 957 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 MCL1Q07820 350 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 BFSP1Q12934 665 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 NR1I3Q14994 352 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 SNRNP35Q16560 246 aaKnown RBP14.37□□□□□ -0.11
BRAT1-205ENST00000473879 KYAT1Q16773 422 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 CTC1Q2NKJ3 1217 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 LEXMQ3ZCV2 418 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 HACE1Q8IYU2 909 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 SAAL1Q96ER3 474 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 PDLIM2Q96JY6 352 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 FBXL18Q96ME1 805 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 TRIM6Q9C030 488 aaPredicted RBP14.37□□□□□ -0.11
BRAT1-205ENST00000473879 NDST4Q9H3R1 872 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 NRDE2Q9H7Z3 1164 aa14.37□□□□□ -0.11
BRAT1-205ENST00000473879 ZNF233A6NK53 670 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 OGTO15294 1046 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 FAM189A1O60320 539 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 STX10O60499 249 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 GALTP07902 379 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 MCF2P10911 925 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 KCNA5P22460 613 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 DEKP35659 375 aaKnown RBP14.36□□□□□ -0.11
BRAT1-205ENST00000473879 PBX3P40426 434 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 KCNQ1P51787 676 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 ERVFC1P60507 584 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 UBXN1Q04323 297 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 DCAF4L1Q3SXM0 396 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 DCAF17Q5H9S7 520 aaPredicted RBP14.36□□□□□ -0.11
BRAT1-205ENST00000473879 MIIPQ5JXC2 388 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 TCERG1LQ5VWI1 586 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 RDH13Q8NBN7 331 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 GSTCDQ8NEC7 633 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 MICAL1Q8TDZ2 1067 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 BORCS6Q96GS4 357 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 PPP1R9BQ96SB3 815 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 FAM213AQ9BRX8 229 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 GIT1Q9Y2X7 761 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 HES2Q9Y543 173 aa14.36□□□□□ -0.11
BRAT1-205ENST00000473879 PDCD11Q14690 1871 aaKnown RBP14.35□□□□□ -0.11
BRAT1-205ENST00000473879 A0A1W2PQC6 194 aa14.35□□□□□ -0.11
BRAT1-205ENST00000473879 GOLGA8IPA6NC78 632 aa14.35□□□□□ -0.11
BRAT1-205ENST00000473879 ARL5CA6NH57 179 aa14.35□□□□□ -0.11
BRAT1-205ENST00000473879 GOLGA8JA6NMD2 632 aa14.35□□□□□ -0.11
BRAT1-205ENST00000473879 N4BP1O75113 896 aaKnown RBP14.35□□□□□ -0.11
BRAT1-205ENST00000473879 ZC3H11AO75152 810 aaKnown RBP eCLIP14.35□□□□□ -0.11
BRAT1-205ENST00000473879 CSPG5O95196 566 aa14.35□□□□□ -0.11
BRAT1-205ENST00000473879 NPTXRO95502 500 aa14.35□□□□□ -0.11
BRAT1-205ENST00000473879 AFPP02771 609 aaKnown RBP14.35□□□□□ -0.11
BRAT1-205ENST00000473879 HARSP12081 509 aaKnown RBP14.35□□□□□ -0.11
BRAT1-205ENST00000473879 VAMP7P51809 220 aa14.35□□□□□ -0.11
BRAT1-205ENST00000473879 AFF1P51825 1210 aaKnown RBP14.35□□□□□ -0.11
BRAT1-205ENST00000473879 ADAM15Q13444 863 aa14.35□□□□□ -0.11
BRAT1-205ENST00000473879 PUS10Q3MIT2 529 aaKnown RBP14.35□□□□□ -0.11
BRAT1-205ENST00000473879 EEF1DP3Q658K8 133 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms