RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 IER2Q9BTL4 223 aa4.33□□□□□ -1.72
LRCH3-213ENST00000471667 PUS3Q9BZE2 481 aaKnown RBP4.33□□□□□ -1.72
LRCH3-213ENST00000471667 OSBPL6Q9BZF3 934 aa4.33□□□□□ -1.72
LRCH3-213ENST00000471667 TCP11L1Q9NUJ3 509 aa4.33□□□□□ -1.72
LRCH3-213ENST00000471667 RAI14Q9P0K7 980 aa4.33□□□□□ -1.72
LRCH3-213ENST00000471667 MRPS17Q9Y2R5 130 aaKnown RBP4.33□□□□□ -1.72
LRCH3-213ENST00000471667 ABCA12Q86UK0 2595 aa4.33□□□□□ -1.72
LRCH3-213ENST00000471667 ZZEF1O43149 2961 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 FLT1P17948 1338 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 PDS5AQ29RF7 1337 aaKnown RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 OR14I1A6ND48 311 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 ELL2O00472 640 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 C1QL1O75973 258 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 EFEMP2O95967 443 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 CTSHP09668 335 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 ZNF806P0C7X5 589 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 STAG3L1P0CL83 205 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 GP1BBP13224 206 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 NCLP19338 710 aaKnown RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 CASTP20810 708 aaKnown RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 CSRP1P21291 193 aaKnown RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 RPL10P27635 214 aaKnown RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 ABCG1P45844 678 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 CCR3P51677 355 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 STARD6P59095 220 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 PFKPQ01813 784 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 MECOMQ03112 1051 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 NMIQ13287 307 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 SERINC3Q13530 473 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 CAMK1Q14012 370 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 PPP2R5BQ15173 497 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 RARS2Q5T160 578 aaKnown RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 ADGRF1Q5T601 910 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 ZNF618Q5T7W0 954 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 PLPP4Q5VZY2 271 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 RSPO2Q6UXX9 243 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 EEPD1Q7L9B9 569 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 NLRX1Q86UT6 975 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 FBXO16Q8IX29 292 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 SIRT2Q8IXJ6 389 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 PHACTR4Q8IZ21 702 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 SPICE1Q8N0Z3 855 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 CPXCR1Q8N123 301 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 LOXL4Q96JB6 756 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 KCNC2Q96PR1 638 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 PLEKHF1Q96S99 279 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 KIF2CQ99661 725 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 WDR11Q9BZH6 1224 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 CCDC8Q9H0W5 538 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 DNAJC18Q9H819 358 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 ADD3Q9UEY8 706 aaKnown RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 PALD1Q9ULE6 856 aa4.32□□□□□ -1.72
LRCH3-213ENST00000471667 POLR3KQ9Y2Y1 108 aaPredicted RBP4.32□□□□□ -1.72
LRCH3-213ENST00000471667 IGSF10Q6WRI0 2623 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 FAM221BA6H8Z2 402 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 SHISA7A6NL88 538 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 B4DLN1 442 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 NARSO43776 548 aaKnown RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 DNAJA2O60884 412 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 CAND2O75155 1236 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 DNAJB1P25685 340 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 GBP2P32456 591 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 ZNF76P36508 570 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 CSRP3P50461 194 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 MRPL12P52815 198 aaKnown RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 RBM10P98175 930 aaKnown RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 KRT17Q04695 432 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 SCAPQ12770 1279 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 GPNMBQ14956 572 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 CCDC6Q16204 474 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 ATP2B3Q16720 1220 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 SHROOM1Q2M3G4 852 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 TAF1BQ53T94 588 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 TSSK4Q6SA08 328 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 RNF111Q6ZNA4 994 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 TMEM179Q6ZVK1 233 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 CABP7Q86V35 215 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 TMEM151BQ8IW70 566 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 VN1R2Q8NFZ6 395 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 ENOX1Q8TC92 643 aaKnown RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 SYTL5Q8TDW5 730 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 SH3RF3Q8TEJ3 882 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 NELL1Q92832 810 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 RHOVQ96L33 236 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 TMEM74Q96NL1 305 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 TCF25Q9BQ70 676 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 SLF1Q9BQI6 1058 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 EDEM2Q9BV94 578 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 HDAC8Q9BY41 377 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 KATNBL1Q9H079 304 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 ACAD9Q9H845 621 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 VCPKMTQ9H867 229 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 PRMT8Q9NR22 394 aaPredicted RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 VPS45Q9NRW7 570 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 TMEM260Q9NX78 707 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 AATFQ9NY61 560 aaKnown RBP eCLIP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 LRP2BPQ9P2M1 347 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 SAP30BPQ9UHR5 308 aaKnown RBP4.31□□□□□ -1.72
LRCH3-213ENST00000471667 ZMYM5Q9UJ78 669 aa4.31□□□□□ -1.72
LRCH3-213ENST00000471667 KLK13Q9UKR3 277 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 319.7 ms