RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 KIF12Q96FN5 646 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 MFSD14AQ96MC6 490 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 MKNK1Q9BUB5 465 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 STK39Q9UEW8 545 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 DACH1Q9UI36 760 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 UBQLN1Q9UMX0 589 aaKnown RBP16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 FRMD4BQ9Y2L6 1034 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 PLXNA4Q9HCM2 1894 aa16.2■□□□□ 0.18
CDC42SE1-203ENST00000470278 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 TRIM49BA6NDI0 452 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 H3BNC9 293 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 TMEM189-UBE2V1I3L0A0 370 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 SLC16A3O15427 465 aaKnown RBP16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 WNT7BP56706 349 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 MCCD1P59942 119 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 PLCB3Q01970 1234 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 UBE3AQ05086 875 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 SOX4Q06945 474 aaPredicted RBP16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 CYP24A1Q07973 514 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 ADAM9Q13443 819 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 TMEM132DQ14C87 1099 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 NFKBIBQ15653 356 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 JADE1Q6IE81 842 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 KLHL10Q6JEL2 608 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 EFCAB13Q8IY85 973 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 FBXO22Q8NEZ5 403 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 HLA-CQ95604 372 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 RWDD2AQ9UIY3 292 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 CTNND2Q9UQB3 1225 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 LZTS1Q9Y250 596 aa16.19■□□□□ 0.18
CDC42SE1-203ENST00000470278 NRP1O14786 923 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 CETN3O15182 167 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 AKAP3O75969 853 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 FGF18O76093 207 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 ALDH2P05091 517 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 NFICP08651 508 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 ERCC5P28715 1186 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 LRPAP1P30533 357 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 RPL9P32969 192 aaKnown RBP16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 PBX3P40426 434 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 CASP4P49662 377 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 CLDN10P78369 228 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 UPP1Q16831 310 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 AAK1Q2M2I8 961 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 SPATA1Q5VX52 437 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 SASS6Q6UVJ0 657 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 TMEM173Q86WV6 379 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 WDR49Q8IV35 697 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 NOC3LQ8WTT2 800 aaKnown RBP16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 FAM212AQ96EL1 285 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 DDX27Q96GQ7 796 aaKnown RBP16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 IGSF21Q96ID5 467 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 CEP63Q96MT8 703 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 GZF1Q9H116 711 aaPredicted RBP16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 PDE11AQ9HCR9 933 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 MARCH5Q9NX47 278 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 SPG21Q9NZD8 308 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 LMCD1Q9NZU5 365 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 TUBGCP4Q9UGJ1 667 aa16.18■□□□□ 0.18
CDC42SE1-203ENST00000470278 CASTOR2A6NHX0 329 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 LETM1O95202 739 aaPredicted RBP16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 EFEMP2O95967 443 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 PSMC2P35998 433 aaKnown RBP16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 PLA2G5P39877 138 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 OR1G1P47890 313 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 SPAG1Q07617 926 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 STX1AQ16623 288 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 CEP135Q66GS9 1140 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 INTS8Q75QN2 995 aaKnown RBP16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 USP37Q86T82 979 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 KLHL23Q8NBE8 558 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 BEST2Q8NFU1 509 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 C18orf25Q96B23 403 aaPredicted RBP16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 TMEM169Q96HH4 297 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 DUSP9Q99956 384 aaKnown RBP16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 PAAF1Q9BRP4 392 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 LRFN3Q9BTN0 628 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 UBE2ZQ9H832 354 aaPredicted RBP16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 GOLGA2P5Q9HBQ8 144 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 FAN1Q9Y2M0 1017 aa16.17■□□□□ 0.18
CDC42SE1-203ENST00000470278 KIF4AO95239 1232 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 ITGB1P05556 798 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 CLCNKBP51801 687 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 COL19A1Q14993 1142 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 FAM186BQ8IYM0 893 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 RNF168Q8IYW5 571 aaPredicted RBP16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 CSGALNACT2Q8N6G5 542 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 RDH13Q8NBN7 331 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 TMC2Q8TDI7 906 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 PARD3BQ8TEW8 1205 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 CACTINQ8WUQ7 758 aaKnown RBP16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 BCL7CQ8WUZ0 217 aaPredicted RBP16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 BORCS6Q96GS4 357 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 FNBP1Q96RU3 617 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 CGRRF1Q99675 332 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 COLEC11Q9BWP8 271 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 LMAN2LQ9H0V9 348 aa16.16■□□□□ 0.18
CDC42SE1-203ENST00000470278 INTS13Q9NVM9 706 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms