RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 MCM4P33991 863 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 MATR3P43243 847 aaKnown RBP eCLIP20.83■□□□□ 0.93
USP11-205ENST00000467378 GLB1LQ6UWU2 654 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 DGLUCYQ7Z3D6 616 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 GSTCDQ8NEC7 633 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 RSPH1Q8WYR4 309 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 CASP10Q92851 521 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 GAD1Q99259 594 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 CWH43Q9H720 699 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 RMND1Q9NWS8 449 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 LZTS1Q9Y250 596 aa20.83■□□□□ 0.93
USP11-205ENST00000467378 ZNF292O60281 2723 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 ARL5CA6NH57 179 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 TGFB1I1O43294 461 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 RECQL4O94761 1208 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 HARSP12081 509 aaKnown RBP20.82■□□□□ 0.92
USP11-205ENST00000467378 LAG3P18627 525 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 OSTNP61366 133 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 CAMK4Q16566 473 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 SEZ6Q53EL9 994 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 NOMO2Q5JPE7 1267 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 NELFCDQ8IXH7 590 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 RMDN1Q96DB5 314 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 ZFP42Q96MM3 310 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 CXCL16Q9H2A7 254 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 CLSTN2Q9H4D0 955 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 NGRNQ9NPE2 291 aaKnown RBP20.82■□□□□ 0.92
USP11-205ENST00000467378 KLK14Q9P0G3 267 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 LIMD1Q9UGP4 676 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 INPP5FQ9Y2H2 1132 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 GDAQ9Y2T3 454 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 VPS13AQ96RL7 3174 aa20.82■□□□□ 0.92
USP11-205ENST00000467378 EP300Q09472 2414 aaPredicted RBP20.82■□□□□ 0.92
USP11-205ENST00000467378 OGTO15294 1046 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 MEFVO15553 781 aaPredicted RBP20.81■□□□□ 0.92
USP11-205ENST00000467378 GARTP22102 1010 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 MLH1P40692 756 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 ITIH3Q06033 890 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 KNOP1Q1ED39 458 aaKnown RBP20.81■□□□□ 0.92
USP11-205ENST00000467378 ALKAL1Q6UXT8 129 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 TMC7Q7Z402 723 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 TDRD5Q8NAT2 981 aaKnown RBP20.81■□□□□ 0.92
USP11-205ENST00000467378 ACAP3Q96P50 834 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 MSTO1Q9BUK6 570 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 CCDC94Q9BW85 323 aaPredicted RBP20.81■□□□□ 0.92
USP11-205ENST00000467378 MRPL9Q9BYD2 267 aaKnown RBP20.81■□□□□ 0.92
USP11-205ENST00000467378 GBP3Q9H0R5 595 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 ADAM7Q9H2U9 754 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 TBC1D13Q9NVG8 400 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 KANSL3Q9P2N6 904 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 MAN1B1Q9UKM7 699 aa20.81■□□□□ 0.92
USP11-205ENST00000467378 AGO2Q9UKV8 859 aaKnown RBP20.81■□□□□ 0.92
USP11-205ENST00000467378 WEE2P0C1S8 567 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 TNFSF9P41273 254 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 MTHFRP42898 656 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 PLCB3Q01970 1234 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 ANGPT1Q15389 498 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 XKR4Q5GH76 650 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 ZBTB41Q5SVQ8 909 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 ZNF658Q5TYW1 1059 aaPredicted RBP20.8■□□□□ 0.92
USP11-205ENST00000467378 CWF19L1Q69YN2 538 aaKnown RBP20.8■□□□□ 0.92
USP11-205ENST00000467378 LRRC43Q8N309 656 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 URGCPQ8TCY9 931 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 POMGNT1Q8WZA1 660 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 KCTD10Q9H3F6 313 aa20.8■□□□□ 0.92
USP11-205ENST00000467378 PTGESO14684 152 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 POMCP01189 267 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 CLTAP09496 248 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 SCNN1GP51170 649 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 SNRPFP62306 86 aaKnown RBP20.79■□□□□ 0.92
USP11-205ENST00000467378 KYAT1Q16773 422 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 SLC10A6Q3KNW5 377 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 COBLL1Q53SF7 1204 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 CRELD2Q6UXH1 353 aaPredicted RBP20.79■□□□□ 0.92
USP11-205ENST00000467378 ZNF280BQ86YH2 543 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 GUF1Q8N442 669 aaKnown RBP20.79■□□□□ 0.92
USP11-205ENST00000467378 ZSWIM2Q8NEG5 633 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 CBWD1Q9BRT8 395 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 NRDE2Q9H7Z3 1164 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 KIAA1468Q9P260 1216 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 CPSF3Q9UKF6 684 aaKnown RBP20.79■□□□□ 0.92
USP11-205ENST00000467378 HCFC2Q9Y5Z7 792 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 DENND4AQ7Z401 1863 aa20.79■□□□□ 0.92
USP11-205ENST00000467378 PI15O43692 258 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 DDHD2O94830 711 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 KIF20AO95235 890 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 AOC1P19801 751 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 CA8P35219 290 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 YARSP54577 528 aaKnown RBP20.78■□□□□ 0.92
USP11-205ENST00000467378 KRT17Q04695 432 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 RARS2Q5T160 578 aaKnown RBP20.78■□□□□ 0.92
USP11-205ENST00000467378 ISM2Q6H9L7 571 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 ARMCX5Q6P1M9 558 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 CCDC105Q8IYK2 499 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 SMYD4Q8IYR2 804 aaPredicted RBP20.78■□□□□ 0.92
USP11-205ENST00000467378 KIAA2013Q8IYS2 634 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 ZDHHC14Q8IZN3 488 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 PLCD3Q8N3E9 789 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 PCIF1Q9H4Z3 704 aa20.78■□□□□ 0.92
USP11-205ENST00000467378 AGPAT3Q9NRZ7 376 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms