RNA–Protein interactions for RNA: ENST00000460797.5

ITGB5-202, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 2,228 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-202ENST00000460797 SSU72Q9NP77 194 aaKnown RBP13.03□□□□□ -0.32
ITGB5-202ENST00000460797 CCNL1Q9UK58 526 aaPredicted RBP13.03□□□□□ -0.32
ITGB5-202ENST00000460797 GRID1Q9ULK0 1009 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 RABGAP1Q9Y3P9 1069 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 FAM13AO94988 1023 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 NMT1P30419 496 aaKnown RBP13.03□□□□□ -0.32
ITGB5-202ENST00000460797 ADCY8P40145 1251 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 ADCY1Q08828 1119 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 ACSBG2Q5FVE4 666 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 FYB2Q5VWT5 728 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 DSTYKQ6XUX3 929 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 STXBP4Q6ZWJ1 553 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 OTOAQ7RTW8 1153 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 ZCCHC9Q8N567 271 aaKnown RBP13.03□□□□□ -0.32
ITGB5-202ENST00000460797 PPFIBP2Q8ND30 876 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 EPS8L1Q8TE68 723 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 LENG9Q96B70 501 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 PTCD3Q96EY7 689 aaKnown RBP13.03□□□□□ -0.32
ITGB5-202ENST00000460797 FIZ1Q96SL8 496 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 SYNCQ9H7C4 482 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 UBE2TQ9NPD8 197 aaPredicted RBP13.03□□□□□ -0.32
ITGB5-202ENST00000460797 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
ITGB5-202ENST00000460797 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 SMAPO00193 183 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.33
ITGB5-202ENST00000460797 SPAG7O75391 227 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 MAGEA4P43358 317 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 ARHGAP4P98171 946 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 COG2Q14746 738 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 ZNF746Q6NUN9 644 aaPredicted RBP13.02□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L6PQ6QN14 398 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.02□□□□□ -0.33
ITGB5-202ENST00000460797 CCDC89Q8N998 374 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 TTC25Q96NG3 672 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 SMC6Q96SB8 1091 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 IKZF4Q9H2S9 585 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 KIAA1586Q9HCI6 787 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 LARSQ9P2J5 1176 aaKnown RBP13.02□□□□□ -0.33
ITGB5-202ENST00000460797 VAV3Q9UKW4 847 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 LY75O60449 1722 aa13.02□□□□□ -0.33
ITGB5-202ENST00000460797 EXOC1LA0A1B0GW35 172 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 USP17L10C9JJH3 530 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 CAPN9O14815 690 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 GSC2O15499 205 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 TYROBPO43914 113 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 DNAJC6O75061 913 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 KRT36O76013 467 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 RRM1P23921 792 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 CYP2J2P51589 502 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 SESN3P58005 492 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 RHBDL3P58872 404 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 EPC2Q52LR7 807 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 TTBK2Q6IQ55 1244 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 C1orf186Q6ZWK4 172 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 KRT27Q7Z3Y8 459 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 ANKS1BQ7Z6G8 1248 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 NOP9Q86U38 636 aaKnown RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 MTDHQ86UE4 582 aaKnown RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 ZC3H18Q86VM9 953 aaKnown RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 NBPF5PQ86XG9 351 aaPredicted RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 ARHGEF19Q8IW93 802 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 MYCT1Q8N699 235 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 ZNF653Q96CK0 615 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 BTBD6Q96KE9 485 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 C9orf72Q96LT7 481 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 PWWP2AQ96N64 755 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 GBP5Q96PP8 586 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 ZNF184Q99676 751 aaPredicted RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 PARVGQ9HBI0 331 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 CHORDC1Q9UHD1 332 aaPredicted RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 GREB1LQ9C091 1923 aaPredicted RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 ZNFX1Q9P2E3 1918 aaKnown RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 FAM170AA1A519 330 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 FAM196BA6NMK8 535 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 A8MXQ7 604 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 MAP3K7O43318 606 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 TBX10O75333 385 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 TROVE2P10155 538 aaKnown RBP eCLIP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 POLD1P28340 1107 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 GABPAQ06546 454 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 CETN1Q12798 172 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 ZC2HC1CQ53FD0 456 aaPredicted RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 PRR16Q569H4 304 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 ZC3H12AQ5D1E8 599 aaKnown RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 RBM26Q5T8P6 1007 aaKnown RBP13.01□□□□□ -0.33
ITGB5-202ENST00000460797 IZUMO3Q5VZ72 239 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 SMIM5Q71RC9 77 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 ZNF720Q7Z2F6 126 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 PRUNE1Q86TP1 453 aa13.01□□□□□ -0.33
ITGB5-202ENST00000460797 FAM71AQ8IYT1 594 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms