RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 KCNT2Q6UVM3 1135 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 MRPL41Q8IXM3 137 aaKnown RBP5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 SCYL3Q8IZE3 742 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 MIER2Q8N344 545 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 ZBTB34Q8NCN2 500 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 FAM156AQ8NDB6 213 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 CXorf38Q8TB03 319 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 DEPTORQ8TB45 409 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 RRP36Q96EU6 259 aaKnown RBP5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 CDCA5Q96FF9 252 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 PIGSQ96S52 555 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 TBCBQ99426 244 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 ACO2Q99798 780 aaKnown RBP5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 DPH2Q9BQC3 489 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 EIF2AK1Q9BQI3 630 aaKnown RBP5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 PHF20Q9BVI0 1012 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 KIAA1683Q9H0B3 1180 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 FOXP1Q9H334 677 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 VCPKMTQ9H867 229 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 LMBRD1Q9NUN5 540 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 BARHL2Q9NY43 387 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 CLIC5Q9NZA1 410 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 CNPY2Q9Y2B0 182 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 COQ6Q9Y2Z9 468 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 PCDHGB6Q9Y5F9 930 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 ZHX2Q9Y6X8 837 aa5.79□□□□□ -1.48
HMGB1P4-201ENST00000455362 A6NNZ2 444 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 GOLGA6L22H0YM25 854 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 LINC01387J3KSC0 135 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 STXBP3O00186 592 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 ZBTB5O15062 677 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 ADAMTS3O15072 1205 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 TLR5O60602 858 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 SNX2O60749 519 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 PPP1R11O60927 126 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 H2AFYO75367 372 aaKnown RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 SRGAP2CP0DJJ0 459 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 GRK2P25098 689 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 CALML3P27482 149 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 NF2P35240 595 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 TM4SF4P48230 202 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 BACE1P56817 501 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 NLRP5P59047 1200 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 FAM193AP78312 1265 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 AUHQ13825 339 aaKnown RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 TMEM177Q53S58 311 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 PRR16Q569H4 304 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 ZC3H12AQ5D1E8 599 aaKnown RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 PPM1JQ5JR12 505 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 GALNT17Q6IS24 598 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 CC2D1AQ6P1N0 951 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 HEATR3Q7Z4Q2 680 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 SAPCD2Q86UD0 394 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 NOSTRINQ8IVI9 506 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 SLC41A1Q8IVJ1 513 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 DIS3L2Q8IYB7 885 aaKnown RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 GRAMD1CQ8IYS0 662 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 VWA5B2Q8N398 1253 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 CAMKK1Q8N5S9 505 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 KLHL23Q8NBE8 558 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 ZNF507Q8TCN5 953 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 CHURC1Q8WUH1 139 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 CYB5D2Q8WUJ1 264 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 NUDT8Q8WV74 236 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 LPAR1Q92633 364 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 WDR89Q96FK6 387 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 ZNF396Q96N95 335 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 SCAND2PQ9GZW5 306 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 NOL6Q9H6R4 1146 aaKnown RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 RSAD1Q9HA92 442 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 JPH1Q9HDC5 661 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 RAD18Q9NS91 495 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 SEC63Q9UGP8 760 aaKnown RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 FEM1BQ9UK73 627 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 RCOR1Q9UKL0 485 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 FBXL21Q9UKT6 434 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 CFAP45Q9UL16 551 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 ISY1Q9ULR0 285 aaKnown RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 NOL7Q9UMY1 257 aaKnown RBP5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 AFG3L2Q9Y4W6 797 aa5.78□□□□□ -1.48
HMGB1P4-201ENST00000455362 ESYT2A0FGR8 921 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 SMCO2A6NFE2 343 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 C19orf81C9J6K1 198 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 hCG_1984214I3L0E3 225 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 J3KRW8 73 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 C2CD2LO14523 706 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 FSCN2O14926 492 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 WDR46O15213 610 aaKnown RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 FANCGO15287 622 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 DDX3YO15523 660 aaKnown RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 WIPF1O43516 503 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 ZRANB2O95218 330 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 HRGP04196 525 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 SCG5P05408 212 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 KRT2P35908 639 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 TOB1P50616 345 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 STAT2P52630 851 aa5.77□□□□□ -1.49
HMGB1P4-201ENST00000455362 NAPAP54920 295 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms