RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 VARS2Q5ST30 1063 aaKnown RBP22.98■■□□□ 1.27
VSX1-206ENST00000444511 FGF13Q92913 245 aa22.98■■□□□ 1.27
VSX1-206ENST00000444511 BICD1Q96G01 975 aa22.98■■□□□ 1.27
VSX1-206ENST00000444511 TBC1D32Q96NH3 1257 aa22.98■■□□□ 1.27
VSX1-206ENST00000444511 ODF2LQ9ULJ1 636 aa22.98■■□□□ 1.27
VSX1-206ENST00000444511 H7C4K7 107 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 MEFVO15553 781 aaPredicted RBP22.97■■□□□ 1.27
VSX1-206ENST00000444511 ELF1P32519 619 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 ROR1Q01973 937 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 MCL1Q07820 350 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 SLC10A6Q3KNW5 377 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 PABPC1LQ4VXU2 614 aaKnown RBP22.97■■□□□ 1.27
VSX1-206ENST00000444511 ARSHQ5FYA8 562 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 SLC8B1Q6J4K2 584 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 BRAPQ7Z569 592 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 GPBP1Q86WP2 473 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 CCDC105Q8IYK2 499 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 RASSF8Q8NHQ8 419 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 ITFG1Q8TB96 612 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 HCFC1R1Q9NWW0 138 aa22.97■■□□□ 1.27
VSX1-206ENST00000444511 CACNA1HO95180 2353 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 MCM4P33991 863 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 NCKAP1LP55160 1127 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 ARPP19P56211 112 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 DHX8Q14562 1220 aaKnown RBP22.96■■□□□ 1.27
VSX1-206ENST00000444511 PARM1Q6UWI2 310 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 MTSS1LQ765P7 747 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 HAUS6Q7Z4H7 955 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 ZNF461Q8TAF7 563 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 FGF14Q92915 247 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 REEP2Q9BRK0 252 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 TBC1D17Q9HA65 648 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 ARHGEF3Q9NR81 526 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 SLC2A4RGQ9NR83 387 aa22.96■■□□□ 1.27
VSX1-206ENST00000444511 DNMT3BQ9UBC3 853 aaKnown RBP22.96■■□□□ 1.27
VSX1-206ENST00000444511 PRRG1O14668 218 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 FAM13AO94988 1023 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 CLTAP09496 248 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 CXCL8P10145 99 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 LIG4P49917 911 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 DTWD2Q8NBA8 298 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 DOCK8Q8NF50 2099 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 SUSD3Q96L08 255 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 RPP25Q9BUL9 199 aaKnown RBP22.95■■□□□ 1.26
VSX1-206ENST00000444511 PLEKHA5Q9HAU0 1116 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 TUBGCP4Q9UGJ1 667 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 KCNH3Q9ULD8 1083 aa22.95■■□□□ 1.26
VSX1-206ENST00000444511 WDR27A2RRH5 827 aa22.94■■□□□ 1.26
VSX1-206ENST00000444511 PROB1E7EW31 1015 aa22.94■■□□□ 1.26
VSX1-206ENST00000444511 LRG1P02750 347 aa22.94■■□□□ 1.26
VSX1-206ENST00000444511 KRT18P05783 430 aaKnown RBP22.94■■□□□ 1.26
VSX1-206ENST00000444511 LONP1P36776 959 aaKnown RBP22.94■■□□□ 1.26
VSX1-206ENST00000444511 CTXN3Q4LDR2 81 aa22.94■■□□□ 1.26
VSX1-206ENST00000444511 MYCT1Q8N699 235 aa22.94■■□□□ 1.26
VSX1-206ENST00000444511 APPL2Q8NEU8 664 aa22.94■■□□□ 1.26
VSX1-206ENST00000444511 FBXL5Q9UKA1 691 aa22.94■■□□□ 1.26
VSX1-206ENST00000444511 MRPS23Q9Y3D9 190 aaKnown RBP22.94■■□□□ 1.26
VSX1-206ENST00000444511 TRIP11Q15643 1979 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 VPS37CA5D8V6 355 aaPredicted RBP22.93■■□□□ 1.26
VSX1-206ENST00000444511 K7ENM7 598 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 HNRNPDLO14979 420 aaKnown RBP22.93■■□□□ 1.26
VSX1-206ENST00000444511 TBC1D4O60343 1298 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 ABLIM3O94929 683 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 PLCG1P19174 1290 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 SCP2P22307 547 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 NBL1P41271 181 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 SPAG1Q07617 926 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 MRPL58Q14197 206 aaKnown RBP22.93■■□□□ 1.26
VSX1-206ENST00000444511 SF3A1Q15459 793 aaKnown RBP22.93■■□□□ 1.26
VSX1-206ENST00000444511 KYAT1Q16773 422 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 ZNF280DQ6N043 979 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 NPAS3Q8IXF0 933 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 ING5Q8WYH8 240 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 HAPLN2Q9GZV7 340 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 ZHX3Q9H4I2 956 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 PARVGQ9HBI0 331 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 CYP4F11Q9HBI6 524 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 TBX20Q9UMR3 447 aa22.93■■□□□ 1.26
VSX1-206ENST00000444511 ARHGEF37A1IGU5 675 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 RHOP08100 348 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 ATF2P15336 505 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 MARCKSP29966 332 aaPredicted RBP22.92■■□□□ 1.26
VSX1-206ENST00000444511 GPC5P78333 572 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 GRIN1Q05586 938 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 PPP2R3AQ06190 1150 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 MCM6Q14566 821 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 KARSQ15046 597 aaKnown RBP22.92■■□□□ 1.26
VSX1-206ENST00000444511 ANGPT1Q15389 498 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 PHLDB3Q6NSJ2 640 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 LRRC15Q8TF66 581 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 RAD54LQ92698 747 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 KCNN1Q92952 543 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 KIF12Q96FN5 646 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 BLOC1S4Q9NUP1 217 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 PCDHB8Q9UN66 801 aa22.92■■□□□ 1.26
VSX1-206ENST00000444511 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.92■■□□□ 1.26
VSX1-206ENST00000444511 TTC26A0AVF1 554 aa22.91■■□□□ 1.26
VSX1-206ENST00000444511 TRAK2O60296 914 aa22.91■■□□□ 1.26
VSX1-206ENST00000444511 TBCAO75347 108 aaKnown RBP22.91■■□□□ 1.26
VSX1-206ENST00000444511 PTPN2P17706 415 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms