RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 KIF20AO95235 890 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 LRPAP1P30533 357 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 DSG1Q02413 1049 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 ADAM15Q13444 863 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 USP41Q3LFD5 358 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 SPATA1Q5VX52 437 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 NT5DC4Q86YG4 428 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 C3orf58Q8NDZ4 430 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 AUTS2Q8WXX7 1259 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 KCTD10Q9H3F6 313 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 IGFLR1Q9H665 355 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 PCDHA5Q9Y5H7 936 aa25.49■■□□□ 1.67
PDGFA-205ENST00000426681 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.48■■□□□ 1.67
PDGFA-205ENST00000426681 GOLGA8IPA6NC78 632 aa25.48■■□□□ 1.67
PDGFA-205ENST00000426681 GOLGA8JA6NMD2 632 aa25.48■■□□□ 1.67
PDGFA-205ENST00000426681 PER2O15055 1255 aa25.48■■□□□ 1.67
PDGFA-205ENST00000426681 URODP06132 367 aa25.48■■□□□ 1.67
PDGFA-205ENST00000426681 NFICP08651 508 aa25.48■■□□□ 1.67
PDGFA-205ENST00000426681 IGFBP6P24592 240 aaPredicted RBP25.48■■□□□ 1.67
PDGFA-205ENST00000426681 GLUD2P49448 558 aa25.48■■□□□ 1.67
PDGFA-205ENST00000426681 TMEM132DQ14C87 1099 aa25.48■■□□□ 1.67
PDGFA-205ENST00000426681 HASPINQ8TF76 798 aa25.48■■□□□ 1.67
PDGFA-205ENST00000426681 UBE2ZQ9H832 354 aaPredicted RBP25.48■■□□□ 1.67
PDGFA-205ENST00000426681 RBAKQ9NYW8 714 aaPredicted RBP25.48■■□□□ 1.67
PDGFA-205ENST00000426681 ZNF233A6NK53 670 aa25.47■■□□□ 1.67
PDGFA-205ENST00000426681 PDXKO00764 312 aa25.47■■□□□ 1.67
PDGFA-205ENST00000426681 CLIC2O15247 247 aa25.47■■□□□ 1.67
PDGFA-205ENST00000426681 TRAPPC3O43617 180 aa25.47■■□□□ 1.67
PDGFA-205ENST00000426681 KCNC3Q14003 757 aa25.47■■□□□ 1.67
PDGFA-205ENST00000426681 KIAA1841Q6NSI8 718 aa25.47■■□□□ 1.67
PDGFA-205ENST00000426681 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.47■■□□□ 1.67
PDGFA-205ENST00000426681 GUF1Q8N442 669 aaKnown RBP25.47■■□□□ 1.67
PDGFA-205ENST00000426681 BEST2Q8NFU1 509 aa25.47■■□□□ 1.67
PDGFA-205ENST00000426681 ATXN2LQ8WWM7 1075 aaKnown RBP25.47■■□□□ 1.67
PDGFA-205ENST00000426681 SMARCE1Q969G3 411 aa25.47■■□□□ 1.67
PDGFA-205ENST00000426681 GTPBP4Q9BZE4 634 aaKnown RBP25.47■■□□□ 1.67
PDGFA-205ENST00000426681 RXFP1Q9HBX9 757 aa25.47■■□□□ 1.67
PDGFA-205ENST00000426681 CLASP2O75122 1294 aaKnown RBP25.46■■□□□ 1.67
PDGFA-205ENST00000426681 LTBRP36941 435 aa25.46■■□□□ 1.67
PDGFA-205ENST00000426681 FAM171A1Q5VUB5 890 aa25.46■■□□□ 1.67
PDGFA-205ENST00000426681 TMEM184AQ6ZMB5 413 aa25.46■■□□□ 1.67
PDGFA-205ENST00000426681 CBWD2Q8IUF1 395 aa25.46■■□□□ 1.67
PDGFA-205ENST00000426681 XXYLT1Q8NBI6 393 aa25.46■■□□□ 1.67
PDGFA-205ENST00000426681 CLDND1Q9NY35 253 aa25.46■■□□□ 1.67
PDGFA-205ENST00000426681 LINC01565O15544 149 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 FGFR3P22607 806 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 WNT7BP56706 349 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.45■■□□□ 1.66
PDGFA-205ENST00000426681 SLC9A9Q8IVB4 645 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 EFCAB13Q8IY85 973 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 B3GALT6Q96L58 329 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 GBP4Q96PP9 640 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 KLHL5Q96PQ7 755 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 TTPALQ9BTX7 342 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 EMILIN2Q9BXX0 1053 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 DMAC2Q9NW81 257 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 TRAF3IP3Q9Y228 551 aa25.45■■□□□ 1.66
PDGFA-205ENST00000426681 CNPP09543 421 aaKnown RBP25.44■■□□□ 1.66
PDGFA-205ENST00000426681 CA8P35219 290 aa25.44■■□□□ 1.66
PDGFA-205ENST00000426681 CYP2J2P51589 502 aa25.44■■□□□ 1.66
PDGFA-205ENST00000426681 MYBPC2Q14324 1141 aa25.44■■□□□ 1.66
PDGFA-205ENST00000426681 SURF1Q15526 300 aa25.44■■□□□ 1.66
PDGFA-205ENST00000426681 SNRNP35Q16560 246 aaKnown RBP25.44■■□□□ 1.66
PDGFA-205ENST00000426681 AAK1Q2M2I8 961 aa25.44■■□□□ 1.66
PDGFA-205ENST00000426681 COBLL1Q53SF7 1204 aa25.44■■□□□ 1.66
PDGFA-205ENST00000426681 RTP2Q5QGT7 225 aa25.44■■□□□ 1.66
PDGFA-205ENST00000426681 ZNF658Q5TYW1 1059 aaPredicted RBP25.44■■□□□ 1.66
PDGFA-205ENST00000426681 VN1R2Q8NFZ6 395 aa25.44■■□□□ 1.66
PDGFA-205ENST00000426681 ERCC4Q92889 916 aaPredicted RBP25.44■■□□□ 1.66
PDGFA-205ENST00000426681 PDE11AQ9HCR9 933 aa25.44■■□□□ 1.66
PDGFA-205ENST00000426681 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.44■■□□□ 1.66
PDGFA-205ENST00000426681 VWA8A3KMH1 1905 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 ANO9A1A5B4 782 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 C2CD2LO14523 706 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 GLP2RO95838 553 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 KCNA5P22460 613 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 PAX3P23760 479 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 GUCY2FP51841 1108 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 MRPS5P82675 430 aaKnown RBP25.43■■□□□ 1.66
PDGFA-205ENST00000426681 CREMQ03060 361 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 TFF2Q03403 129 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 C9orf57Q5W0N0 161 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 PDXDC1Q6P996 788 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 PPFIBP1Q86W92 1011 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 TMEM130Q8N3G9 435 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 NOC3LQ8WTT2 800 aaKnown RBP25.43■■□□□ 1.66
PDGFA-205ENST00000426681 CACTINQ8WUQ7 758 aaKnown RBP25.43■■□□□ 1.66
PDGFA-205ENST00000426681 RIN2Q8WYP3 895 aaPredicted RBP25.43■■□□□ 1.66
PDGFA-205ENST00000426681 PIK3R5Q8WYR1 880 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 DPP3Q9NY33 737 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 FNIP2Q9P278 1114 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 MAPK8IP1Q9UQF2 711 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 NUB1Q9Y5A7 615 aa25.43■■□□□ 1.66
PDGFA-205ENST00000426681 PIRO00625 290 aa25.42■■□□□ 1.66
PDGFA-205ENST00000426681 TBX10O75333 385 aa25.42■■□□□ 1.66
PDGFA-205ENST00000426681 BRCC3P46736 316 aa25.42■■□□□ 1.66
PDGFA-205ENST00000426681 AARSP49588 968 aaKnown RBP eCLIP25.42■■□□□ 1.66
PDGFA-205ENST00000426681 DLX2Q07687 328 aaPredicted RBP25.42■■□□□ 1.66
PDGFA-205ENST00000426681 NFIL3Q16649 462 aa25.42■■□□□ 1.66
PDGFA-205ENST00000426681 LEXMQ3ZCV2 418 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms