RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 LARP4BQ92615 738 aaKnown RBP5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 DCLRE1CQ96SD1 692 aaKnown RBP5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 AKIP1Q9NQ31 210 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 ZIM2Q9NZV7 527 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 USP25Q9UHP3 1055 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 ZNF180Q9UJW8 692 aa5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 REXO2Q9Y3B8 237 aaKnown RBP5.86□□□□□ -1.47
HMGB1P49-201ENST00000418882 CENPVL1A0A0U1RR11 272 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 AKAP8O43823 692 aaKnown RBP5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 RECQL4O94761 1208 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 PEX11BO96011 259 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 KRT4P19013 534 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 MALP21145 153 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 GCSHP23434 173 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 EPHB1P54762 984 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 RAB39AQ14964 217 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 B3GNTL1Q67FW5 361 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 LENG9Q96B70 501 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 NUP88Q99567 741 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 ANLNQ9NQW6 1124 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 HSFX1Q9UBD0 423 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 ANKRD6Q9Y2G4 727 aa5.85□□□□□ -1.47
HMGB1P49-201ENST00000418882 F2RL2O00254 374 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 FZD7O75084 574 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 ZFPL1O95159 310 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 NDUFA10O95299 355 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 FCER1AP12319 257 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 MAP2K6P52564 334 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 PABPC1LQ4VXU2 614 aaKnown RBP5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 GADL1Q6ZQY3 521 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 TTC7BQ86TV6 843 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 HPS3Q969F9 1004 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 MARS2Q96GW9 593 aaKnown RBP5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 FAM193BQ96PV7 902 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 TLR10Q9BXR5 811 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 CALCOCO1Q9P1Z2 691 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 FZD1Q9UP38 647 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 PCDHA3Q9Y5H8 950 aa5.84□□□□□ -1.47
HMGB1P49-201ENST00000418882 PRSS29PA6NIE9 313 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 UNC119BA6NIH7 251 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 TMEM200CA6NKL6 621 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 DIRC3C9JPN6 131 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 RNASET2O00584 256 aaKnown RBP5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 HAUS5O94927 633 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 SCGB1D2O95969 90 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 S100BP04271 92 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 ALDH2P05091 517 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 CFIP05156 583 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 FGFR4P22455 802 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 AKAP5P24588 427 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 HSD11B2P80365 405 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 CREMQ03060 361 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 NOGQ13253 232 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 ATAT1Q5SQI0 421 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 PPP4R3AQ6IN85 833 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 SLC4A10Q6U841 1118 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 B3GNT9Q6UX72 402 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 MAPKAPK5Q8IW41 473 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 ANKRD13AQ8IZ07 590 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 CPEB3Q8NE35 698 aaKnown RBP5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 TMIEQ8NEW7 156 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 IL17RDQ8NFM7 739 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 TBC1D15Q8TC07 691 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 JDP2Q8WYK2 163 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 RGMAQ96B86 450 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 MVB12AQ96EY5 273 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 MYEOVQ96EZ4 313 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 C1orf43Q9BWL3 253 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 TMPRSS5Q9H3S3 457 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 ANKFY1Q9P2R3 1169 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 G3BP2Q9UN86 482 aaKnown RBP5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 EID1Q9Y6B2 187 aa5.83□□□□□ -1.48
HMGB1P49-201ENST00000418882 A0A1B0GTW7 788 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 SLC43A1O75387 559 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 AGFG2O95081 481 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 LPOP22079 712 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 ABHD18Q0P651 414 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 SCAPQ12770 1279 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 NFE2Q16621 373 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 PGS1Q32NB8 556 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 UTP14CQ5TAP6 766 aaKnown RBP5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 EPM2AIP1Q7L775 607 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 VRK3Q8IV63 474 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 FITM2Q8N6M3 262 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 HAS1Q92839 578 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 NACC2Q96BF6 587 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 LRGUKQ96M69 825 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 KLHL32Q96NJ5 620 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 PCED1AQ9H1Q7 454 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 NOB1Q9ULX3 412 aaKnown RBP5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 ATP11BQ9Y2G3 1177 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 FPGT-TNNI3KV9GXZ4 949 aa5.82□□□□□ -1.48
HMGB1P49-201ENST00000418882 E2F8A0AVK6 867 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 GAGE12BA1L429 117 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 GAGE12HA6NDE8 117 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 FTLP02792 175 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 CT47B1P0C2W7 299 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 CKBP12277 381 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 ALAS1P13196 640 aa5.81□□□□□ -1.48
HMGB1P49-201ENST00000418882 LAG3P18627 525 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms