RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 ZFP14Q9HCL3 533 aa17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 MTF2Q9Y483 593 aaPredicted RBP17.06■□□□□ 0.32
SBDSP1-201ENST00000415772 MAN2B1O00754 1011 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 CPB1P15086 417 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 CEBPBP17676 345 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 SDHBP21912 280 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 MARCKSP29966 332 aaPredicted RBP17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 MCM4P33991 863 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 FXR2P51116 673 aaKnown RBP eCLIP17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 CTXN3Q4LDR2 81 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 KRT79Q5XKE5 535 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 ZNF280DQ6N043 979 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 CEP120Q8N960 986 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 ELSPBP1Q96BH3 223 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 ZNF512Q96ME7 567 aaPredicted RBP17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 ACO2Q99798 780 aaKnown RBP17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 CDT1Q9H211 546 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 HEBP1Q9NRV9 189 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 RAB23Q9ULC3 237 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 NDRG2Q9UN36 371 aaKnown RBP17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 LIMCH1Q9UPQ0 1083 aa17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 RBM19Q9Y4C8 960 aaKnown RBP17.05■□□□□ 0.32
SBDSP1-201ENST00000415772 SYN3O14994 580 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 MCF2P10911 925 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 TARSP26639 723 aaKnown RBP17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 RPL9P32969 192 aaKnown RBP17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 NPTX2P47972 431 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 TRAPPC10P48553 1259 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 HMGN5P82970 282 aaKnown RBP17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 ADCY1Q08828 1119 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 SLC8B1Q6J4K2 584 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 C3orf58Q8NDZ4 430 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 APPL2Q8NEU8 664 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 DNASE1L2Q92874 299 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 IRF7Q92985 503 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 TRMT61BQ9BVS5 477 aaKnown RBP17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 SLITRK6Q9H5Y7 841 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 TMEM134Q9H6X4 195 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 ZSCAN32Q9NX65 697 aa17.04■□□□□ 0.32
SBDSP1-201ENST00000415772 DMDP11532 3685 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 ARHGEF37A1IGU5 675 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 WDR27A2RRH5 827 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 HIP1RO75146 1068 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 ATF2P15336 505 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 RPS9P46781 194 aaKnown RBP17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 GRM2Q14416 872 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 PDIA5Q14554 519 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 SLC5A9Q2M3M2 681 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 TPGS2Q68CL5 300 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 TANGO2Q6ICL3 276 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 MPZL3Q6UWV2 235 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 TCEAL8Q8IYN2 117 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 MAML2Q8IZL2 1156 aaPredicted RBP17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 SUMF1Q8NBK3 374 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 LLPHQ9BRT6 129 aaKnown RBP17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 TARS2Q9BW92 718 aaKnown RBP17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 PLA2G2FQ9BZM2 168 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 UPF2Q9HAU5 1272 aaKnown RBP17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 AVENQ9NQS1 362 aaPredicted RBP17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 ANKFY1Q9P2R3 1169 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 KCNG1Q9UIX4 513 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 GMEB2Q9UKD1 530 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 INSL5Q9Y5Q6 135 aa17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 PTPRZ1P23471 2315 aaPredicted RBP17.03■□□□□ 0.32
SBDSP1-201ENST00000415772 VWA8A3KMH1 1905 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 E9PMD0 336 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 ABLIM3O94929 683 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 MYL4P12829 197 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 IGFBP6P24592 240 aaPredicted RBP17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 SMTNP53814 917 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 NRLP54845 237 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 SOX4Q06945 474 aaPredicted RBP17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 ECM1Q16610 540 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 RSPO4Q2I0M5 234 aaPredicted RBP17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 YAF2Q8IY57 180 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 C17orf75Q9HAS0 396 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 ASAH2Q9NR71 780 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 USP18Q9UMW8 372 aa17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 SMG5Q9UPR3 1016 aaKnown RBP17.02■□□□□ 0.32
SBDSP1-201ENST00000415772 MED19A0JLT2 244 aaPredicted RBP17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 GDI1P31150 447 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 TSSK4Q6SA08 328 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 LEMD2Q8NC56 503 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 FBXO18Q8NFZ0 1043 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 CSGALNACT1Q8TDX6 532 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 CLDN23Q96B33 292 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 BICD1Q96G01 975 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 CDK5RAP3Q96JB5 506 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 TIPINQ9BVW5 301 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 FAM126AQ9BYI3 521 aaPredicted RBP17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 FBXL5Q9UKA1 691 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 COL4A3Q01955 1670 aa17.01■□□□□ 0.31
SBDSP1-201ENST00000415772 PATJQ8NI35 1801 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 FAM186AA6NE01 2351 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 LAD1O00515 517 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 ZNF263O14978 683 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 SLC16A4O15374 487 aa17■□□□□ 0.31
SBDSP1-201ENST00000415772 TBC1D4O60343 1298 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms