RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 PGS1Q32NB8 556 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 ARHGAP15Q53QZ3 475 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 APOBEC3FQ8IUX4 373 aaKnown RBP19.41■□□□□ 0.7
SHANK3-202ENST00000414786 FOXP4Q8IVH2 680 aaPredicted RBP19.41■□□□□ 0.7
SHANK3-202ENST00000414786 MTERF3Q96E29 417 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 RPS6KB2Q9UBS0 482 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 ACTN3Q08043 901 aaPredicted RBP19.41■□□□□ 0.7
SHANK3-202ENST00000414786 SMTNL2Q2TAL5 461 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 SENP2Q9HC62 589 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 NAGPAQ9UK23 515 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 RALBP11234 206 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 ACSF2Q96CM8 615 aaPredicted RBP19.41■□□□□ 0.7
SHANK3-202ENST00000414786 YME1L1Q96TA2 773 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 ZFYVE28Q9HCC9 887 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 TRIM10Q9UDY6 481 aa19.41■□□□□ 0.7
SHANK3-202ENST00000414786 PP2D1A8MPX8 630 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 F8W810 466 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 MAP3K10Q02779 954 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 UBE3CQ15386 1083 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 NT5DC4Q86YG4 428 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 TMEM60Q9H2L4 133 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 CUEDC2Q9H467 287 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 C20orf96Q9NUD7 363 aaPredicted RBP19.4■□□□□ 0.7
SHANK3-202ENST00000414786 MAP3K1Q13233 1512 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 TRAPPC3O43617 180 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 GUCY1A2P33402 732 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 CENPPQ6IPU0 288 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 PNMA5Q96PV4 448 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 COA1Q9GZY4 146 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 HAUS5O94927 633 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 PRKCBP05771 671 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 ZFXP17010 805 aaPredicted RBP19.4■□□□□ 0.7
SHANK3-202ENST00000414786 SPIRE2Q8WWL2 714 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 OSBP2Q969R2 916 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 ABCB6Q9NP58 842 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 RNF103O00237 685 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 ZBTB39O15060 712 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 ARFIP2P53365 341 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 STN1Q9H668 368 aaKnown RBP19.4■□□□□ 0.7
SHANK3-202ENST00000414786 PTPRHQ9HD43 1115 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 PSD3Q9NYI0 1048 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 APOA1P02647 267 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 ITGA4P13612 1032 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 KPNA1P52294 538 aaPredicted RBP19.4■□□□□ 0.7
SHANK3-202ENST00000414786 TRAF7Q6Q0C0 670 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 COPS7BQ9H9Q2 264 aaPredicted RBP19.4■□□□□ 0.7
SHANK3-202ENST00000414786 NFIBO00712 420 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 CYP26A1O43174 497 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 TRIM16O95361 564 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 PTPN7P35236 360 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 AP2B1P63010 937 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 DRAP1Q14919 205 aaPredicted RBP19.4■□□□□ 0.7
SHANK3-202ENST00000414786 HLFQ16534 295 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 GLRA4Q5JXX5 417 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 CEP95Q96GE4 821 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 ZFATQ9P243 1243 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 IP6K2Q9UHH9 426 aa19.4■□□□□ 0.7
SHANK3-202ENST00000414786 CYP21A2P08686 494 aa19.39■□□□□ 0.7
SHANK3-202ENST00000414786 ABCD1P33897 745 aa19.39■□□□□ 0.7
SHANK3-202ENST00000414786 ACTR2P61160 394 aa19.39■□□□□ 0.7
SHANK3-202ENST00000414786 MICALL2Q8IY33 904 aa19.39■□□□□ 0.7
SHANK3-202ENST00000414786 INTS2Q9H0H0 1204 aaKnown RBP19.39■□□□□ 0.7
SHANK3-202ENST00000414786 THPOP40225 353 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 ALDH7A1P49419 539 aaKnown RBP19.39■□□□□ 0.69
SHANK3-202ENST00000414786 OTOAQ7RTW8 1153 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 HAUS6Q7Z4H7 955 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 ADGRF4Q8IZF3 695 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 AHCYL2Q96HN2 611 aaKnown RBP19.39■□□□□ 0.69
SHANK3-202ENST00000414786 PARD6BQ9BYG5 372 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 MAP3K6O95382 1288 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 CCDC3Q9BQI4 270 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 SNX8Q9Y5X2 465 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 TEX14Q8IWB6 1497 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 HARS2P49590 506 aaKnown RBP19.39■□□□□ 0.69
SHANK3-202ENST00000414786 NDEL1Q9GZM8 345 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 MAGEF1Q9HAY2 307 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 TBC1D4O60343 1298 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 POU1F1P28069 291 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 HUNKP57058 714 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 ACAD9Q9H845 621 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 AIM2O14862 343 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 YWHAQP27348 245 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 PMS2P54278 862 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 GALNTL6Q49A17 601 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 DCAF6Q58WW2 860 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 SGF29Q96ES7 293 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 CRLS1Q9UJA2 301 aa19.39■□□□□ 0.69
SHANK3-202ENST00000414786 NBPF26B4DH59 902 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 PLOD1Q02809 727 aaPredicted RBP19.38■□□□□ 0.69
SHANK3-202ENST00000414786 KCNH2Q12809 1159 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 KCNB1Q14721 858 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 SCFD1Q8WVM8 642 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 EMSYQ7Z589 1322 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 SH2B2O14492 632 aaPredicted RBP19.38■□□□□ 0.69
SHANK3-202ENST00000414786 RGS5O15539 181 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 SERPINB3P29508 390 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 RANBP1P43487 201 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 GPR1P46091 355 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 COASYQ13057 564 aa19.38■□□□□ 0.69
SHANK3-202ENST00000414786 NACC2Q96BF6 587 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms