RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 STAMQ92783 540 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 C18orf25Q96B23 403 aaPredicted RBP12.2□□□□□ -0.46
RFFL-204ENST00000414419 TSPAN18Q96SJ8 248 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 HAPLN2Q9GZV7 340 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 PLEKHA4Q9H4M7 779 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 OLFML3Q9NRN5 406 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 RCOR1Q9UKL0 485 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 AGO2Q9UKV8 859 aaKnown RBP12.2□□□□□ -0.46
RFFL-204ENST00000414419 UBQLN1Q9UMX0 589 aaKnown RBP12.2□□□□□ -0.46
RFFL-204ENST00000414419 ANK1P16157 1881 aa12.2□□□□□ -0.46
RFFL-204ENST00000414419 CCDC195A0A1B0GUA6 201 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 TTC26A0AVF1 554 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 LACTBL1A8MY62 500 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 ANKRD63C9JTQ0 380 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 TGM5O43548 720 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 FGFR3P22607 806 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 MCM4P33991 863 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 BRCC3P46736 316 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 ACOT2P49753 483 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 ASIC1P78348 528 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 SPAG1Q07617 926 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 E2F4Q16254 413 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 AXDND1Q5T1B0 1012 aaPredicted RBP12.19□□□□□ -0.46
RFFL-204ENST00000414419 L1TD1Q5T7N2 865 aaKnown RBP12.19□□□□□ -0.46
RFFL-204ENST00000414419 C15orf39Q6ZRI6 1047 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 ANKS3Q6ZW76 656 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 GPR149Q86SP6 731 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 CEP57L1Q8IYX8 460 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 KREMEN2Q8NCW0 462 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 C3orf58Q8NDZ4 430 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 KHSRPQ92945 711 aaKnown RBP eCLIP12.19□□□□□ -0.46
RFFL-204ENST00000414419 SPATA32Q96LK8 384 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 POMKQ9H5K3 350 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 TMEM206Q9H813 350 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 MAGEF1Q9HAY2 307 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 PIDD1Q9HB75 910 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 KBTBD4Q9NVX7 518 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 CDH22Q9UJ99 828 aa12.19□□□□□ -0.46
RFFL-204ENST00000414419 FRMD3A2A2Y4 597 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 I3L4J1 428 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 PPP1R37O75864 691 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 CYP3A5P20815 502 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 TKTP29401 623 aaKnown RBP12.18□□□□□ -0.46
RFFL-204ENST00000414419 ENOX2Q16206 610 aaKnown RBP12.18□□□□□ -0.46
RFFL-204ENST00000414419 TMEM31Q5JXX7 168 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 ZBTB41Q5SVQ8 909 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 LIN9Q5TKA1 542 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 RESP18Q5W5W9 173 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 SLC39A4Q6P5W5 647 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 CYP26C1Q6V0L0 522 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 CCDC149Q6ZUS6 474 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 BEST2Q8NFU1 509 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 CMASQ8NFW8 434 aaPredicted RBP12.18□□□□□ -0.46
RFFL-204ENST00000414419 ACSF2Q96CM8 615 aaPredicted RBP12.18□□□□□ -0.46
RFFL-204ENST00000414419 CLSTN3Q9BQT9 956 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 TRIM9Q9C026 710 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 ASB7Q9H672 318 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 TUBGCP4Q9UGJ1 667 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 MUTYHQ9UIF7 546 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 CPSF3Q9UKF6 684 aaKnown RBP12.18□□□□□ -0.46
RFFL-204ENST00000414419 KCNH3Q9ULD8 1083 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 STYXL1Q9Y6J8 313 aa12.18□□□□□ -0.46
RFFL-204ENST00000414419 DOCK6Q96HP0 2047 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.17□□□□□ -0.46
RFFL-204ENST00000414419 TISP43B9A030 160 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 H7C4K7 107 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 SYN3O14994 580 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 MEFVO15553 781 aaPredicted RBP12.17□□□□□ -0.46
RFFL-204ENST00000414419 FAM189A1O60320 539 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 PRPF6O94906 941 aaKnown RBP12.17□□□□□ -0.46
RFFL-204ENST00000414419 LDHAP00338 332 aaKnown RBP12.17□□□□□ -0.46
RFFL-204ENST00000414419 IGFBP6P24592 240 aaPredicted RBP12.17□□□□□ -0.46
RFFL-204ENST00000414419 LRPAP1P30533 357 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 OR1D2P34982 312 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 AFMP43652 599 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 KCNA1Q09470 495 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 TMEM132DQ14C87 1099 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 ZBTB6Q15916 424 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 JADE1Q6IE81 842 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 LILRA6Q6PI73 481 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 CD300LGQ6UXG3 332 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 TDRD5Q8NAT2 981 aaKnown RBP12.17□□□□□ -0.46
RFFL-204ENST00000414419 APPL2Q8NEU8 664 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 NOC3LQ8WTT2 800 aaKnown RBP12.17□□□□□ -0.46
RFFL-204ENST00000414419 SMG7Q92540 1137 aaKnown RBP12.17□□□□□ -0.46
RFFL-204ENST00000414419 C7orf25Q9BPX7 421 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 STRA6Q9BX79 667 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 SCAND2PQ9GZW5 306 aaPredicted RBP12.17□□□□□ -0.46
RFFL-204ENST00000414419 ZDHHC7Q9NXF8 308 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 MTRRQ9UBK8 725 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 DERAQ9Y315 318 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 BACE2Q9Y5Z0 518 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 CDY1Q9Y6F8 540 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 DENND4AQ7Z401 1863 aa12.17□□□□□ -0.46
RFFL-204ENST00000414419 C2CD4DB7Z1M9 353 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 GPR37L1O60883 481 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 RFPL2O75678 378 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 ZMYND10O75800 440 aa12.16□□□□□ -0.46
RFFL-204ENST00000414419 IL18RAPO95256 599 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms