RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 NCAPG2Q86XI2 1143 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 CCDC144CPQ8IYA2 1237 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 SVOPQ8N4V2 548 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 LRRN4CLQ8ND94 238 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 OR13H1Q8NG92 308 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 GRIN3AQ8TCU5 1115 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 RAET1EQ8TD07 263 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 WHAMMQ8TF30 809 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 TNPO1Q92973 898 aaKnown RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 COA7Q96BR5 231 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 MAGEB10Q96LZ2 347 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 RIPOR3Q96MK2 946 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 JAKMIP1Q96N16 626 aaKnown RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 FAM193BQ96PV7 902 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 NEK1Q96PY6 1258 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 BARD1Q99728 777 aaKnown RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 NUDT16L1Q9BRJ7 211 aaKnown RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 APOL5Q9BWW9 433 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 LGR4Q9BXB1 951 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 NUCKS1Q9H1E3 243 aaKnown RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 VPS11Q9H270 941 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 DEF6Q9H4E7 631 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 LY9Q9HBG7 655 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 EMC7Q9NPA0 242 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 FAM86C1Q9NVL1 165 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 C14orf119Q9NWQ9 140 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 HOXC10Q9NYD6 342 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 PSD3Q9NYI0 1048 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 GMIPQ9P107 970 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 CDC23Q9UJX2 597 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 FEM1BQ9UK73 627 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 ZNF214Q9UL59 606 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 SYNPO2Q9UMS6 1093 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 INVSQ9Y283 1065 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 RIPK3Q9Y572 518 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 PCDHGA9Q9Y5G4 932 aaKnown RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 PCDHGA8Q9Y5G5 932 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 PCDHGA7Q9Y5G6 932 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 PCDHGA6Q9Y5G7 932 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 PCDHGA3Q9Y5H0 932 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 PCDHGA2Q9Y5H1 932 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 SNX14Q9Y5W7 946 aa5.01□□□□□ -1.61
SF3B1-202ENST00000409915 COL11A1P12107 1806 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-202ENST00000409915 MGAMO43451 1857 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 ZNF536O15090 1300 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 MKI67P46013 3256 aaKnown RBP5□□□□□ -1.61
SF3B1-202ENST00000409915 PLXNB2O15031 1838 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 ERICH2A1L162 156 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 BLACEA4D250 179 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 ANKRD34BA5PLL1 514 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 SYNDIG1LA6NDD5 238 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 PLOD3O60568 738 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 ZBED4O75132 1171 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 TIPRLO75663 272 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 INMTO95050 263 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 PLEKHA8P1O95397 391 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 PGK2P07205 417 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 PARP1P09874 1014 aaKnown RBP5□□□□□ -1.61
SF3B1-202ENST00000409915 ALAS1P13196 640 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 RAG1P15918 1043 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 CASTP20810 708 aaKnown RBP5□□□□□ -1.61
SF3B1-202ENST00000409915 RPS6KB1P23443 525 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 ADORA2AP29274 412 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 MAPK4P31152 587 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 PPM1AP35813 382 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 CCNA1P78396 465 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 DSG1Q02413 1049 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 TYRO3Q06418 890 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 GAS6Q14393 721 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 GRB14Q14449 540 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 GRM4Q14833 912 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 ZSCAN26Q16670 478 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 KIAA0753Q2KHM9 967 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 USH1GQ495M9 461 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 C4orf17Q53FE4 359 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 CCDC178Q5BJE1 867 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 DNAJC21Q5F1R6 531 aaKnown RBP5□□□□□ -1.61
SF3B1-202ENST00000409915 GPATCH4Q5T3I0 446 aaKnown RBP5□□□□□ -1.61
SF3B1-202ENST00000409915 KIAA1614Q5VZ46 1190 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 SLC6A19Q695T7 634 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 ITPRIPL1Q6GPH6 555 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 CYP26C1Q6V0L0 522 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 NFXL1Q6ZNB6 911 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 SV2AQ7L0J3 742 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 FAM160B2Q86V87 743 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 MICU3Q86XE3 530 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 PTRH1Q86Y79 214 aaKnown RBP5□□□□□ -1.61
SF3B1-202ENST00000409915 KIF18BQ86Y91 864 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 RIOX2Q8IUF8 465 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 SULF2Q8IWU5 870 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 LMNTD2Q8IXW0 634 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 OR2C3Q8N628 320 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 MB21D1Q8N884 522 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 ZNF513Q8N8E2 541 aaPredicted RBP5□□□□□ -1.61
SF3B1-202ENST00000409915 LSMEM1Q8N8F7 131 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 FAM184AQ8NB25 1140 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 NPLOC4Q8TAT6 608 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 STK35Q8TDR2 534 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 ASAP3Q8TDY4 903 aa5□□□□□ -1.61
SF3B1-202ENST00000409915 IGDCC4Q8TDY8 1250 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms