RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 H3BRB1 525 aa17.75■□□□□ 0.43
PCDHA13-202ENST00000409494 NFIBO00712 420 aa17.75■□□□□ 0.43
PCDHA13-202ENST00000409494 NOL3O60936 208 aaKnown RBP17.75■□□□□ 0.43
PCDHA13-202ENST00000409494 ROR1Q01973 937 aa17.75■□□□□ 0.43
PCDHA13-202ENST00000409494 NT5DC4Q86YG4 428 aa17.75■□□□□ 0.43
PCDHA13-202ENST00000409494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCDHA13-202ENST00000409494 TUT1Q9H6E5 874 aaKnown RBP17.75■□□□□ 0.43
PCDHA13-202ENST00000409494 KANSL3Q9P2N6 904 aa17.75■□□□□ 0.43
PCDHA13-202ENST00000409494 USH1CQ9Y6N9 552 aa17.75■□□□□ 0.43
PCDHA13-202ENST00000409494 AK9Q5TCS8 1911 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 MTSS1O43312 755 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 ATP1A1P05023 1023 aaKnown RBP17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 TMEM253P0C7T8 217 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 MAGEA9P43362 315 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 YAF2Q8IY57 180 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 DEPDC1BQ8WUY9 529 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 PPP1R12CQ9BZL4 782 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 CYP3A43Q9HB55 503 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 SLC2A3P11169 496 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 CDH6P55285 790 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 E2F5Q15329 346 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 ATG16L1Q676U5 607 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 CEP120Q8N960 986 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 GLIS2Q9BZE0 524 aaPredicted RBP17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 FAM198AQ9UFP1 575 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 RIC1Q4ADV7 1423 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 TARSL2A2RTX5 802 aaKnown RBP17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 MED24O75448 989 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 CHEK2O96017 543 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 FXR1P51114 621 aaKnown RBP eCLIP17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 ALDH5A1P51649 535 aaPredicted RBP17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 COG1Q8WTW3 980 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 KRT35Q92764 455 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 SLC5A5Q92911 643 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 SLITRK1Q96PX8 696 aa17.74■□□□□ 0.43
PCDHA13-202ENST00000409494 APOL1O14791 398 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 KLRC1P26715 233 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 PDCLQ13371 301 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 CCDC38Q502W7 563 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 NFRKBQ6P4R8 1299 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 GSPT2Q8IYD1 628 aaKnown RBP17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 GDAP1Q8TB36 358 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 TACO1Q9BSH4 297 aaKnown RBP17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 ZNF518BQ9C0D4 1074 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 GTPBP10A4D1E9 387 aaKnown RBP17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 NPTXRO95502 500 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 PDGFRAP16234 1089 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 ZC2HC1CQ53FD0 456 aaPredicted RBP17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 CATSPERGQ6ZRH7 1159 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 ASAP3Q8TDY4 903 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 P2RX7Q99572 595 aaKnown RBP17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 PLEKHA5Q9HAU0 1116 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 HEY1Q9Y5J3 304 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 LOC102724159A0A0B4J2E5 919 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 ERVK-9P63128 1117 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 ERVK-24P63145 666 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 PWP2Q15269 919 aaKnown RBP17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 NXNQ6DKJ4 435 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 GANCQ8TET4 914 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 CHP1Q99653 195 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 PCSK1NQ9UHG2 260 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 PLAAQ9Y263 795 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 SLC15A5A6NIM6 579 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 AP5Z1O43299 807 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 KLHDC7AQ5VTJ3 777 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 RAD9BQ6WBX8 426 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 ZNF410Q86VK4 478 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 TMEM169Q96HH4 297 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 CPA4Q9UI42 421 aa17.73■□□□□ 0.43
PCDHA13-202ENST00000409494 PPP1R3GB7ZBB8 358 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 PIK3CDO00329 1044 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 CREB3O43889 395 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 THPOP40225 353 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 NPTX2P47972 431 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 GIT2Q14161 759 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 PCBP1Q15365 356 aaKnown RBP eCLIP17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 SHCBP1Q8NEM2 672 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 ATL2Q8NHH9 583 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 RNF25Q96BH1 459 aaPredicted RBP17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 ACTR5Q9H9F9 607 aaPredicted RBP17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 L2HGDHQ9H9P8 463 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 GNL1P36915 607 aaPredicted RBP17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 TPI1P60174 286 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 SCAF8Q9UPN6 1271 aaKnown RBP17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 ALDH7A1P49419 539 aaKnown RBP17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 MTA1Q13330 715 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 BTNL9Q6UXG8 535 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 ZPBP2Q6X784 338 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 PPCSQ9HAB8 311 aa17.72■□□□□ 0.43
PCDHA13-202ENST00000409494 EGFRP00533 1210 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 MCF2P10911 925 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 PAX3P23760 479 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 ZNF235Q14590 738 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 CHADLQ6NUI6 762 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 CGRRF1Q99675 332 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 STARD7Q9NQZ5 370 aa17.71■□□□□ 0.43
PCDHA13-202ENST00000409494 ATRNO75882 1429 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms