RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 XRRA1Q6P2D8 792 aa18.69■□□□□ 0.58
SNED1-204ENST00000401884 POP1Q99575 1024 aaKnown RBP18.69■□□□□ 0.58
SNED1-204ENST00000401884 EXTL3O43909 919 aa18.69■□□□□ 0.58
SNED1-204ENST00000401884 WEE2P0C1S8 567 aa18.69■□□□□ 0.58
SNED1-204ENST00000401884 NCF2P19878 526 aaPredicted RBP18.69■□□□□ 0.58
SNED1-204ENST00000401884 KCNA1Q09470 495 aa18.69■□□□□ 0.58
SNED1-204ENST00000401884 MTM1Q13496 603 aa18.69■□□□□ 0.58
SNED1-204ENST00000401884 C1orf228Q6PIY5 440 aa18.69■□□□□ 0.58
SNED1-204ENST00000401884 C4orf33Q8N1A6 199 aa18.69■□□□□ 0.58
SNED1-204ENST00000401884 FGFR1OP2Q9NVK5 253 aa18.69■□□□□ 0.58
SNED1-204ENST00000401884 CPSF2Q9P2I0 782 aaKnown RBP18.69■□□□□ 0.58
SNED1-204ENST00000401884 AFG3L2Q9Y4W6 797 aa18.69■□□□□ 0.58
SNED1-204ENST00000401884 ZBTB39O15060 712 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 HAUS5O94927 633 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 ATG4AQ8WYN0 398 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 SLC13A1Q9BZW2 595 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 MYOZ2Q9NPC6 264 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 PFDN4Q9NQP4 134 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 HAUS2Q9NVX0 235 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 PNMA3Q9UL41 463 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 LPXNO60711 386 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 FAM153BP0C7A2 387 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 SRGAP2BP0DMP2 458 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 SKIP12755 728 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 MRC1P22897 1456 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 MAGEA4P43358 317 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 ARFIP2P53365 341 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 FAM153CQ494X1 144 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 MMEL1Q495T6 779 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 ZNF677Q86XU0 584 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 ATP8B4Q8TF62 1192 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 HSD3B7Q9H2F3 369 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 DHX35Q9H5Z1 703 aaKnown RBP18.68■□□□□ 0.58
SNED1-204ENST00000401884 ALG13Q9NP73 1137 aaKnown RBP18.68■□□□□ 0.58
SNED1-204ENST00000401884 FAM153AQ9UHL3 310 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 CASP5P51878 434 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 PIGHQ14442 188 aaPredicted RBP18.68■□□□□ 0.58
SNED1-204ENST00000401884 RDM1Q8NG50 284 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 DDX23Q9BUQ8 820 aaKnown RBP18.68■□□□□ 0.58
SNED1-204ENST00000401884 NOL3O60936 208 aaKnown RBP18.68■□□□□ 0.58
SNED1-204ENST00000401884 SLURP2P0DP57 97 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 TXNP10599 105 aaKnown RBP18.68■□□□□ 0.58
SNED1-204ENST00000401884 SLC12A3P55017 1021 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 MXD4Q14582 209 aaPredicted RBP18.68■□□□□ 0.58
SNED1-204ENST00000401884 PTF1AQ7RTS3 328 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 CCDC68Q9H2F9 335 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 TMBIM4Q9HC24 238 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 KLHL8Q9P2G9 620 aaPredicted RBP18.68■□□□□ 0.58
SNED1-204ENST00000401884 REXO2Q9Y3B8 237 aaKnown RBP18.68■□□□□ 0.58
SNED1-204ENST00000401884 TACC3Q9Y6A5 838 aa18.68■□□□□ 0.58
SNED1-204ENST00000401884 AKAP12Q02952 1782 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 PDGFRAP16234 1089 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 ERVK-9P63128 1117 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 MYBPC2Q14324 1141 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 GPR162Q16538 588 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 NKX2-3Q8TAU0 364 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 AENQ8WTP8 325 aaKnown RBP18.67■□□□□ 0.58
SNED1-204ENST00000401884 SGSM3Q96HU1 749 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 CYTH2Q99418 400 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 RARRES1P49788 294 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 ACTR2P61160 394 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 HEATR6Q6AI08 1181 aaKnown RBP18.67■□□□□ 0.58
SNED1-204ENST00000401884 SV2AQ7L0J3 742 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 SAMD7Q7Z3H4 446 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 RSPH3Q86UC2 560 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 FEZF2Q8TBJ5 459 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 WDR35Q9P2L0 1181 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 GTF2H1P32780 548 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 KCNMA1Q12791 1236 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 GPAT2Q6NUI2 795 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 TRPM8Q7Z2W7 1104 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 DCLK2Q8N568 766 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 MCUQ8NE86 351 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 RBM46Q8TBY0 533 aaKnown RBP18.67■□□□□ 0.58
SNED1-204ENST00000401884 GPRASP2Q96D09 838 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 KIF12Q96FN5 646 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 FOXP3Q9BZS1 431 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 AGAP1Q9UPQ3 857 aa18.67■□□□□ 0.58
SNED1-204ENST00000401884 SLIT3O75094 1523 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 CFAP69A5D8W1 941 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 FAM47DPA6NHR8 397 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 PIK3R2O00459 728 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 DDR1Q08345 913 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 DBN1Q16643 649 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 SYCP2LQ5T4T6 812 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 SPOPLQ6IQ16 392 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 TTC39CQ8N584 583 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 AGBL3Q8NEM8 1001 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 BEST2Q8NFU1 509 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 IDI2Q9BXS1 227 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 TPX2Q9ULW0 747 aaKnown RBP18.66■□□□□ 0.58
SNED1-204ENST00000401884 PCDHGC5Q9Y5F6 944 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 HUS1O60921 280 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 RRM1P23921 792 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 C15orf52Q6ZUT6 534 aaKnown RBP18.66■□□□□ 0.58
SNED1-204ENST00000401884 SMG5Q9UPR3 1016 aaKnown RBP18.66■□□□□ 0.58
SNED1-204ENST00000401884 CST8O60676 142 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 CAND2O75155 1236 aa18.66■□□□□ 0.58
SNED1-204ENST00000401884 SLC47A2Q86VL8 602 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms