RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 WNT7BP56706 349 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 SKIV2LQ15477 1246 aaKnown RBP31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 COBLL1Q53SF7 1204 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 SPATA1Q5VX52 437 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 PDE12Q6L8Q7 609 aaKnown RBP31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 KIAA1841Q6NSI8 718 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 TRIML1Q8N9V2 468 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 CCDC127Q96BQ5 260 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 FNBP1Q96RU3 617 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 VN1R3Q9BXE9 311 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 NGRNQ9NPE2 291 aaKnown RBP31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 ANK1P16157 1881 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 CXCL14O95715 111 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 PPP1R2P41236 205 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 SMC1AQ14683 1233 aaKnown RBP31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 SURF1Q15526 300 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 SLC9A9Q8IVB4 645 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 EFCAB13Q8IY85 973 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 CACTINQ8WUQ7 758 aaKnown RBP31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 PPP2R3CQ969Q6 453 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 GPR62Q9BZJ7 368 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 DMAC2Q9NW81 257 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 DPP3Q9NY33 737 aa31.83■■■□□ 2.69
CHCHD4-202ENST00000396914 DLATP10515 647 aaKnown RBP31.82■■■□□ 2.68
CHCHD4-202ENST00000396914 CYP24A1Q07973 514 aa31.82■■■□□ 2.68
CHCHD4-202ENST00000396914 ADAM9Q13443 819 aa31.82■■■□□ 2.68
CHCHD4-202ENST00000396914 TCEAL5Q5H9L2 206 aa31.82■■■□□ 2.68
CHCHD4-202ENST00000396914 TAS1R1Q7RTX1 841 aa31.82■■■□□ 2.68
CHCHD4-202ENST00000396914 CEP57Q86XR8 500 aa31.82■■■□□ 2.68
CHCHD4-202ENST00000396914 NT5DC4Q86YG4 428 aa31.82■■■□□ 2.68
CHCHD4-202ENST00000396914 AUTS2Q8WXX7 1259 aa31.82■■■□□ 2.68
CHCHD4-202ENST00000396914 ZBP1Q9H171 429 aa31.82■■■□□ 2.68
CHCHD4-202ENST00000396914 C2CD2LO14523 706 aa31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 SOD2P04179 222 aa31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 URODP06132 367 aa31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 TMEM191BP0C7N4 346 aa31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 CD44P16070 742 aaKnown RBP31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 BMP6P22004 513 aa31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 MYBPC2Q14324 1141 aa31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 LMBRD2Q68DH5 695 aaPredicted RBP31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 RBM23Q86U06 439 aaKnown RBP31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 C3orf58Q8NDZ4 430 aa31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 DHTKD1Q96HY7 919 aaPredicted RBP31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 HERC2P3Q9BVR0 1158 aa31.81■■■□□ 2.68
CHCHD4-202ENST00000396914 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 FSCN2O14926 492 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 TRAPPC3O43617 180 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 CTSAP10619 480 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 TNNI1P19237 187 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 IGFBP6P24592 240 aaPredicted RBP31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 LRPAP1P30533 357 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 CASP4P49662 377 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 ELAVL2Q12926 359 aaKnown RBP31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 FAM171A1Q5VUB5 890 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 CENPPQ6IPU0 288 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 B3GALT6Q96L58 329 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 IGFLR1Q9H665 355 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 MRPL17Q9NRX2 175 aaKnown RBP31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 CTNND2Q9UQB3 1225 aa31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 PRRC2BQ5JSZ5 2229 aaKnown RBP31.8■■■□□ 2.68
CHCHD4-202ENST00000396914 TMEM189-UBE2V1I3L0A0 370 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 I3L4J1 428 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 GLUD2P49448 558 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 PSMD6Q15008 389 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 EDRF1Q3B7T1 1238 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 USP41Q3LFD5 358 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 ANKRD40Q6AI12 368 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 ADGRD2Q7Z7M1 963 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 ANKRD36BP1Q96IX9 119 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 TLE6Q9H808 572 aa31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 R3HCC1Q9Y3T6 440 aaKnown RBP31.79■■■□□ 2.68
CHCHD4-202ENST00000396914 TRIM49BA6NDI0 452 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 HIDE1A8MVS5 230 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 PPP1R3GB7ZBB8 358 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 TNNC2P02585 160 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 CCNE1P24864 410 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 BRCC3P46736 316 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 NFIL3Q16649 462 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 ZCWPW2Q504Y3 356 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 MRPL43Q8N983 215 aaKnown RBP31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 NELFBQ8WX92 580 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 EEF2KMTQ96G04 330 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 FAM84AQ96KN4 292 aa31.78■■■□□ 2.68
CHCHD4-202ENST00000396914 CETN3O15182 167 aa31.77■■■□□ 2.68
CHCHD4-202ENST00000396914 NRIP1P48552 1158 aa31.77■■■□□ 2.68
CHCHD4-202ENST00000396914 C9orf57Q5W0N0 161 aa31.77■■■□□ 2.68
CHCHD4-202ENST00000396914 EP400NLQ6ZTU2 488 aa31.77■■■□□ 2.68
CHCHD4-202ENST00000396914 TMEM174Q8WUU8 243 aa31.77■■■□□ 2.68
CHCHD4-202ENST00000396914 MFSD14AQ96MC6 490 aa31.77■■■□□ 2.68
CHCHD4-202ENST00000396914 POP1Q99575 1024 aaKnown RBP31.77■■■□□ 2.68
CHCHD4-202ENST00000396914 MTMR12Q9C0I1 747 aa31.77■■■□□ 2.68
CHCHD4-202ENST00000396914 SSX2IPQ9Y2D8 614 aa31.77■■■□□ 2.68
CHCHD4-202ENST00000396914 ATG2AQ2TAZ0 1938 aa31.76■■■□□ 2.68
CHCHD4-202ENST00000396914 PER2O15055 1255 aa31.76■■■□□ 2.68
CHCHD4-202ENST00000396914 KRT19P08727 400 aa31.76■■■□□ 2.68
CHCHD4-202ENST00000396914 PMS1P54277 932 aaKnown RBP31.76■■■□□ 2.68
CHCHD4-202ENST00000396914 LRRC63Q05C16 580 aa31.76■■■□□ 2.68
CHCHD4-202ENST00000396914 DUOXA2Q1HG44 320 aa31.76■■■□□ 2.68
CHCHD4-202ENST00000396914 WDR49Q8IV35 697 aa31.76■■■□□ 2.68
CHCHD4-202ENST00000396914 FAM186BQ8IYM0 893 aa31.76■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms