RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 PLCB1Q9NQ66 1216 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 CASS4Q9NQ75 786 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 PLK2Q9NYY3 685 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 SAMD15Q9P1V8 674 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 DBF4Q9UBU7 674 aaPredicted RBP3.85□□□□□ -1.79
XRCC4-203ENST00000396027 POLG2Q9UHN1 485 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 TCEAL9Q9UHQ7 104 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 ZNHIT2Q9UHR6 403 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 SLC12A4Q9UP95 1085 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 ANGPTL3Q9Y5C1 460 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 SNX11Q9Y5W9 270 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 ACTL7BQ9Y614 415 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 FGD6Q6ZV73 1430 aa3.85□□□□□ -1.79
XRCC4-203ENST00000396027 ADGRL1O94910 1474 aa3.84□□□□□ -1.79
XRCC4-203ENST00000396027 SH3PXD2BA1X283 911 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 FRMD3A2A2Y4 597 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 DYTNA2CJ06 578 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TSPY2A6NKD2 308 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 E9PBE3 544 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 H3BQV1 296 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 APOL1O14791 398 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 MCF2LO15068 1137 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 BET1O15155 118 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ALOX15BO15296 676 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 GRIN2DO15399 1336 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 KCNQ3O43525 872 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 EXTL3O43909 919 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 PFKFB2O60825 505 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TCEA3O75764 348 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 PCF11O94913 1555 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 FKBP9O95302 570 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ASMTLO95671 621 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ZBED1O96006 694 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 LDHAP00338 332 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TSPY3P0CV98 308 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TSPY8P0CW00 308 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 CALM1P0DP23 149 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 CALM2P0DP24 149 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 CALM3P0DP25 149 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 DLATP10515 647 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SP100P23497 879 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TYK2P29597 1187 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 HOXA7P31268 230 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 NUDT1P36639 197 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 PPARGP37231 505 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 EIF3BP55884 814 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 BPIFB4P59827 614 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SRP54P61011 504 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TSPY1Q01534 308 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TAGLNQ01995 201 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ZBTB16Q05516 673 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 RNASELQ05823 741 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SCRN3Q0VDG4 424 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TBL3Q12788 808 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 IQGAP2Q13576 1575 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 IDI1Q13907 227 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TRIM14Q14142 442 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 NR1D2Q14995 579 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ACAP1Q15027 740 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 PTGISQ16647 500 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 RABL6Q3YEC7 729 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ANKDD1AQ495B1 522 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TNNI3KQ59H18 835 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 PPP6R3Q5H9R7 873 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 RBM20Q5T481 1227 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ATAD3BQ5T9A4 648 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 EFCAB6Q5THR3 1501 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SYDE2Q5VT97 1194 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ARMC3Q5W041 872 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 HAUS3Q68CZ6 603 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 CEP85Q6P2H3 762 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TMEM154Q6P9G4 183 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 BORAQ6PGQ7 559 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 CORO6Q6QEF8 472 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 DTHD1Q6ZMT9 781 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 LINC00299Q6ZSB3 139 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ARHGAP27Q6ZUM4 889 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 TMTC3Q6ZXV5 915 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ANO5Q75V66 913 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 LIMS2Q7Z4I7 341 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 CPLX4Q7Z7G2 160 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 MRPL10Q7Z7H8 261 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ITIH5Q86UX2 942 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 LMTK2Q8IWU2 1503 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ZBED8Q8IZ13 594 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 BBS5Q8N3I7 341 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ENDOVQ8N8Q3 282 aaKnown RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 FNDC8Q8TC99 324 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 GPR152Q8TDT2 470 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 DDI1Q8WTU0 396 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 CCDC12Q8WUD4 166 aaPredicted RBP3.84□□□□□ -1.8
XRCC4-203ENST00000396027 SCFD1Q8WVM8 642 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ASB11Q8WXH4 323 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 DNAJC9Q8WXX5 260 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 STARD8Q92502 1023 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 CCT6BQ92526 530 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 EME1Q96AY2 570 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ERP27Q96DN0 273 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 ARL5BQ96KC2 179 aa3.84□□□□□ -1.8
XRCC4-203ENST00000396027 UROC1Q96N76 676 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms