RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 KYNUQ16719 465 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 NIPA1Q7RTP0 329 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 TRMT1LQ7Z2T5 733 aaKnown RBP19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 IWS1Q96ST2 819 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 MLXIPLQ9NP71 852 aa19.56■□□□□ 0.72
PCDHA1-202ENST00000394633 NFIBO00712 420 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 CLTAP09496 248 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 ELF1P32519 619 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 MPP2Q14168 576 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 GALNTL6Q49A17 601 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 ANKRD42Q8N9B4 389 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 FBXL13Q8NEE6 735 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 KIFAP3Q92845 792 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 PWWP2AQ96N64 755 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 KIFC3Q9BVG8 833 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 DCLK3Q9C098 648 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 RAB20Q9NX57 234 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 FEM1BQ9UK73 627 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 CCPG1Q9ULG6 757 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 TBX20Q9UMR3 447 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 UBIAD1Q9Y5Z9 338 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 ZNF536O15090 1300 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 MROH7Q68CQ1 1323 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 ATP5DP30049 168 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 NF2P35240 595 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 MRPS9P82933 396 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 FAM102BQ5T8I3 360 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 NUGGCQ68CJ6 796 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 DPY19L2Q6NUT2 758 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 SYDE1Q6ZW31 735 aaPredicted RBP19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 CKAP2Q8WWK9 683 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 L3MBTL3Q96JM7 780 aaPredicted RBP19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 TIPINQ9BVW5 301 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 KCNK9Q9NPC2 374 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 NINJ2Q9NZG7 142 aa19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 R3HDM2Q9Y2K5 976 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-202ENST00000394633 GH1P01241 217 aa19.54■□□□□ 0.72
PCDHA1-202ENST00000394633 UNGP13051 313 aaPredicted RBP19.54■□□□□ 0.72
PCDHA1-202ENST00000394633 RIPK1Q13546 671 aa19.54■□□□□ 0.72
PCDHA1-202ENST00000394633 PLA2G4FQ68DD2 849 aa19.54■□□□□ 0.72
PCDHA1-202ENST00000394633 PNMA8AQ86V59 439 aaPredicted RBP19.54■□□□□ 0.72
PCDHA1-202ENST00000394633 CYP4X1Q8N118 509 aa19.54■□□□□ 0.72
PCDHA1-202ENST00000394633 TMEM161BQ8NDZ6 487 aa19.54■□□□□ 0.72
PCDHA1-202ENST00000394633 SUN1O94901 812 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 KRT5P13647 590 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 NQO1P15559 274 aaKnown RBP19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 SCP2P22307 547 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 CNGA1P29973 690 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 KCNJ2P63252 427 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 DCAF15Q66K64 600 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 PHLDB2Q86SQ0 1253 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 MAP4K3Q8IVH8 894 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 GDAP1Q8TB36 358 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 MAIP1Q8WWC4 291 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 CLEC4DQ8WXI8 215 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 TBC1D31Q96DN5 1066 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 ECT2Q9H8V3 914 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 EXOC7Q9UPT5 735 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 THAP12O43422 761 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 ICAM1P05362 532 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 CETPP11597 493 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 BRAFP15056 766 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 ATF2P15336 505 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 MAN1A1P33908 653 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 LLGL2Q6P1M3 1020 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 SLC39A4Q6P5W5 647 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 C4orf19Q8IY42 314 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 MCOLN2Q8IZK6 566 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 TMC2Q8TDI7 906 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 GRK7Q8WTQ7 553 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 N4BP2L2Q92802 583 aaPredicted RBP19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 DDX27Q96GQ7 796 aaKnown RBP19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 MFSD14AQ96MC6 490 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 PI4K2AQ9BTU6 479 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 ATP6V0A4Q9HBG4 840 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 ZNF112Q9UJU3 913 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 ANAPC5Q9UJX4 755 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 NEU2Q9Y3R4 380 aa19.53■□□□□ 0.72
PCDHA1-202ENST00000394633 GLTPD2A6NH11 291 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 SORBS3O60504 671 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 TCEA3O75764 348 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 GAS8O95995 478 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 NPTX2P47972 431 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 VPS41P49754 854 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 CAV1Q03135 178 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 MTMR1Q13613 665 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 ZNF268Q14587 947 aaPredicted RBP19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 XKR9Q5GH70 373 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 DAB2IPQ5VWQ8 1189 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 TLDC1Q6P9B6 456 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 SV2AQ7L0J3 742 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 KLRG1Q96E93 195 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 TRAIPQ9BWF2 469 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 AVENQ9NQS1 362 aaPredicted RBP19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 ARID2Q68CP9 1835 aa19.52■□□□□ 0.72
PCDHA1-202ENST00000394633 GJB6O95452 261 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 RRM1P23921 792 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 EPHX2P34913 555 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 ADCY8P40145 1251 aa19.52■□□□□ 0.71
PCDHA1-202ENST00000394633 CYP24A1Q07973 514 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms