RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 XPO7Q9UIA9 1087 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 PDS5AQ29RF7 1337 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 PITPNM2Q9BZ72 1349 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 DDTLA6NHG4 134 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 PDXKO00764 312 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 TTC4O95801 387 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PGK2P07205 417 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 CSE1LP55060 971 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 RPS6P62753 249 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 ANGEL2Q5VTE6 544 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 METTL23Q86XA0 190 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 NUP93Q8N1F7 819 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 EMC1Q8N766 993 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 TRIML2Q8N7C3 387 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 USP38Q8NB14 1042 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 KIAA0895Q8NCT3 520 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 C1orf131Q8NDD1 294 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 NCLNQ969V3 563 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 RBM41Q96IZ5 413 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 ANKZF1Q9H8Y5 726 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 TBC1D22BQ9NU19 505 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SUCLA2Q9P2R7 463 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 MOSPD1Q9UJG1 213 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 CNTRLQ7Z7A1 2325 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 CST8O60676 142 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 HUS1O60921 280 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 AKAP3O75969 853 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 HLA-DRAP01903 254 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PRKCEQ02156 737 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 DGKZQ13574 1117 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 NAB2Q15742 525 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 DUOXA2Q1HG44 320 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SHROOM1Q2M3G4 852 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 RABGAP1LQ5R372 815 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 GPAT2Q6NUI2 795 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 KCNK18Q7Z418 384 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SPATA21Q7Z572 469 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 WDR75Q8IWA0 830 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 KAT2BQ92831 832 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 ERLEC1Q96DZ1 483 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 RNF181Q9P0P0 153 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 CNOT7Q9UIV1 285 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 AURKCQ9UQB9 309 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PIN4Q9Y237 131 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 UBTFL6P0CB48 400 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 SKIP12755 728 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 BMP6P22004 513 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 COPS2P61201 443 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 LRRC34Q8IZ02 419 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 TSC22D3Q99576 134 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 WNT8AQ9H1J5 351 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SPATS2LQ9NUQ6 558 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 ASNSD1Q9NWL6 643 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 NAGPAQ9UK23 515 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 LRFN2Q9ULH4 789 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 NPTXRO95502 500 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 MT-CO1P00395 513 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PRKCBP05771 671 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 ENO3P13929 434 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 XPAP23025 273 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 PRAMEP78395 509 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 KRT76Q01546 638 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 RC3H1Q5TC82 1133 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 PPP4R4Q6NUP7 873 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 TTI2Q6NXR4 508 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 ZNF571Q7Z3V5 609 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 DDIASQ8IXT1 998 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 ICA1LQ8NDH6 482 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 TPCN2Q8NHX9 752 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SPATA18Q8TC71 538 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SDCCAG3Q96C92 435 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 GJD4Q96KN9 370 aaPredicted RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 MKNK1Q9BUB5 465 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SLC5A4Q9NY91 659 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 EPS15L1Q9UBC2 864 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 HPSEQ9Y251 543 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 NFIBO00712 420 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 UPP2O95045 317 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 NR3C2P08235 984 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 AVPR1AP37288 418 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 CCNA1P78396 465 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 PDIA5Q14554 519 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 EPHA7Q15375 998 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 ATG16L1Q676U5 607 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 LVRNQ6Q4G3 990 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 SLC25A41Q8N5S1 370 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 FBXO25Q8TCJ0 367 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 MRPL4Q9BYD3 311 aaKnown RBP5.27□□□□□ -1.57
LTN1-202ENST00000389194 OSBPL8Q9BZF1 889 aa5.27□□□□□ -1.57
LTN1-202ENST00000389194 TECPR2O15040 1411 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 NCOA3Q9Y6Q9 1424 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 AIM2O14862 343 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 TSPAN3O60637 253 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 HSPA9P38646 679 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 IREB2P48200 963 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 NME5P56597 212 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 CAPRIN1Q14444 709 aaKnown RBP5.26□□□□□ -1.57
LTN1-202ENST00000389194 MAP3K21Q5TCX8 1036 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 PLA2G12BQ9BX93 195 aa5.26□□□□□ -1.57
LTN1-202ENST00000389194 METTL5Q9NRN9 209 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms