RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 PASD1Q8IV76 773 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 C18orf8Q96DM3 657 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 LXNQ9BS40 222 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 THTPAQ9BU02 230 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 BEGAINQ9BUH8 593 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 PLA2G12BQ9BX93 195 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 EPC1Q9H2F5 836 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 ADNPQ9H2P0 1102 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 RSAD1Q9HA92 442 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 AURKCQ9UQB9 309 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 GEMIN4P57678 1058 aaKnown RBP10.06□□□□□ -0.8
SNX1-202ENST00000380285 MYCBPAPQ8TBZ2 947 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 NLRP4Q96MN2 994 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 RMDN3Q96TC7 470 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 ZNF556Q9HAH1 456 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 SYBUQ9NX95 663 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 KIF28PB7ZC32 967 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 M0R3G1 203 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 PSTPIP1O43586 416 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 HOXA13P31271 388 aaPredicted RBP10.06□□□□□ -0.8
SNX1-202ENST00000380285 COPAP53621 1224 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 STX5Q13190 355 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 TRIM28Q13263 835 aaKnown RBP10.06□□□□□ -0.8
SNX1-202ENST00000380285 TRIP10Q15642 601 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 DPY19L2Q6NUT2 758 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 DDHD1Q8NEL9 900 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 RIN3Q8TB24 985 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 PRPF18Q99633 342 aaKnown RBP10.06□□□□□ -0.8
SNX1-202ENST00000380285 AIPL1Q9NZN9 384 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 XPO7Q9UIA9 1087 aaKnown RBP10.06□□□□□ -0.8
SNX1-202ENST00000380285 APPL1Q9UKG1 709 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 POTEFA5A3E0 1075 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 POTEIP0CG38 1075 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 MAGEA4P43358 317 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 PTK7Q13308 1070 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 ANO4Q32M45 955 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 POTEGQ6S5H5 508 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 POTEEQ6S8J3 1075 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 DDIASQ8IXT1 998 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 METP08581 1390 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 AKAP10O43572 662 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 FKBP6O75344 327 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 IGKV5-2P06315 115 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 SLC27A3Q5K4L6 730 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 KRT27Q7Z3Y8 459 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 DNAJC7Q99615 494 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 SIKE1Q9BRV8 207 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 HOXC10Q9NYD6 342 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 MAD2L2Q9UI95 211 aa10.06□□□□□ -0.8
SNX1-202ENST00000380285 CES2O00748 559 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 ZNF197O14709 1029 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 GDF11O95390 407 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 PYGMP11217 842 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 CASP1P29466 404 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 FXR1P51114 621 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNX1-202ENST00000380285 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNX1-202ENST00000380285 NSUN2Q08J23 767 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNX1-202ENST00000380285 SPDYCQ5MJ68 293 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 RBM43Q6ZSC3 357 aaKnown RBP10.05□□□□□ -0.8
SNX1-202ENST00000380285 NEDD1Q8NHV4 660 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 TNIP3Q96KP6 325 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 RMDN2Q96LZ7 410 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 DLGAP2Q9P1A6 1054 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 AGO2Q9UKV8 859 aaKnown RBP10.05□□□□□ -0.8
SNX1-202ENST00000380285 MAGED2Q9UNF1 606 aaPredicted RBP10.05□□□□□ -0.8
SNX1-202ENST00000380285 CYP2D7A0A087X1C5 515 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 GSG1L2A8MUP6 293 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 CNTFP26441 200 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 HSD17B3P37058 310 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 RABL6Q3YEC7 729 aaPredicted RBP10.05□□□□□ -0.8
SNX1-202ENST00000380285 PPIL6Q8IXY8 311 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 CCDC126Q96EE4 140 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 MS4A14Q96JA4 679 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 LMCD1Q9NZU5 365 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 ASAP1Q9ULH1 1129 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 LRFN2Q9ULH4 789 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 TSC22D4Q9Y3Q8 395 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 FMR1Q06787 632 aaKnown RBP eCLIP10.05□□□□□ -0.88e-16■■■■■ 29.9
SNX1-202ENST00000380285 PAPD7Q5XG87 772 aaKnown RBP10.05□□□□□ -0.8
SNX1-202ENST00000380285 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.05□□□□□ -0.8
SNX1-202ENST00000380285 CDC26Q8NHZ8 85 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 DDX50Q9BQ39 737 aaKnown RBP10.05□□□□□ -0.8
SNX1-202ENST00000380285 ZNF302Q9NR11 478 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 DIABLOQ9NR28 239 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 OLFML3Q9NRN5 406 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 USP32Q8NFA0 1604 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 C3orf70A6NLC5 250 aaPredicted RBP10.05□□□□□ -0.8
SNX1-202ENST00000380285 SFI1A8K8P3 1242 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 B2RBV5 119 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 CALB2P22676 271 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 SCTRP47872 440 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 RBBP7Q16576 425 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 ZCWPW2Q504Y3 356 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 SH3RF3Q8TEJ3 882 aaPredicted RBP10.05□□□□□ -0.8
SNX1-202ENST00000380285 DPF2Q92785 391 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 ENO4A6NNW6 628 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 RECQLP46063 649 aaPredicted RBP10.05□□□□□ -0.8
SNX1-202ENST00000380285 LONRF1Q17RB8 773 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 RAD9BQ6WBX8 426 aa10.05□□□□□ -0.8
SNX1-202ENST00000380285 PRPF39Q86UA1 669 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms