RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 CYP26B1Q9NR63 512 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ASIC3Q9UHC3 531 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ASAP2O43150 1006 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 SORBS3O60504 671 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 HLA-DRAP01903 254 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ITIH2P19823 946 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ACOT2P49753 483 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 PRKCEQ02156 737 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 PTK6Q13882 451 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 SCARA3Q6AZY7 606 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 MCPH1Q8NEM0 835 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 BICD1Q96G01 975 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 CCDC114Q96M63 670 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 CEP89Q96ST8 783 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 PLVAPQ9BX97 442 aa11.66□□□□□ -0.54
BEST1-201ENST00000378043 ROPN1BQ9BZX4 212 aaPredicted RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 POLR3FQ9H1D9 316 aaPredicted RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 ROPN1Q9HAT0 212 aaPredicted RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 APOBEC3GQ9HC16 384 aaKnown RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 DNAJC17Q9NVM6 304 aaKnown RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 SEPT9Q9UHD8 586 aaPredicted RBP11.66□□□□□ -0.54
BEST1-201ENST00000378043 LCTP09848 1927 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 ZNF541Q9H0D2 1346 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 MAFGO15525 162 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 EXTL3O43909 919 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 RALAP11233 206 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 SLC1A1P43005 524 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 IFNAR2P48551 515 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 ITGA8P53708 1063 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 TAS2R40P59535 323 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 PSMD6Q15008 389 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 SWT1Q5T5J6 900 aaKnown RBP11.65□□□□□ -0.54
BEST1-201ENST00000378043 ABHD15Q6UXT9 468 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 CCDC197Q8NCU1 140 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 ZNF526Q8TF50 670 aaPredicted RBP11.65□□□□□ -0.54
BEST1-201ENST00000378043 SNF8Q96H20 258 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 FAM81BQ96LP2 452 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 FAM118BQ9BPY3 351 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 HEMGNQ9BXL5 484 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 KDM4CQ9H3R0 1056 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 JPH1Q9HDC5 661 aaPredicted RBP11.65□□□□□ -0.54
BEST1-201ENST00000378043 KLC4Q9NSK0 619 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 CTNNAL1Q9UBT7 734 aa11.65□□□□□ -0.54
BEST1-201ENST00000378043 ZNF214Q9UL59 606 aaPredicted RBP11.65□□□□□ -0.54
BEST1-201ENST00000378043 CTDP1Q9Y5B0 961 aaPredicted RBP11.65□□□□□ -0.54
BEST1-201ENST00000378043 CCT8L1PA6NM43 557 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 ATP2C2O75185 946 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 PROSCO94903 275 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 TTC4O95801 387 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 ATP4AP20648 1035 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 SSTR3P32745 418 aaPredicted RBP11.65□□□□□ -0.55
BEST1-201ENST00000378043 GTF2A1P52655 376 aaPredicted RBP11.65□□□□□ -0.55
BEST1-201ENST00000378043 ACTR2P61160 394 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 KYNUQ16719 465 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 ZBTB41Q5SVQ8 909 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 VSTM1Q6UX27 236 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 ZNF677Q86XU0 584 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 FUKQ8N0W3 1084 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 IPO4Q8TEX9 1081 aaKnown RBP11.65□□□□□ -0.55
BEST1-201ENST00000378043 ZBTB45Q96K62 511 aaPredicted RBP11.65□□□□□ -0.55
BEST1-201ENST00000378043 CCDC113Q9H0I3 377 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 ATP6V0A4Q9HBG4 840 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 STYXL1Q9Y6J8 313 aa11.65□□□□□ -0.55
BEST1-201ENST00000378043 PHIPQ8WWQ0 1821 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 DOCK1Q14185 1865 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 PSAPP07602 524 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 FDX1P10109 184 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 MYBL1P10243 752 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 TNNI1P19237 187 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 NSFP46459 744 aaKnown RBP11.64□□□□□ -0.55
BEST1-201ENST00000378043 MNAT1P51948 309 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 SP2Q02086 613 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 PTP4A2Q12974 167 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 MAMLD1Q13495 774 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 SNRNP48Q6IEG0 339 aaKnown RBP11.64□□□□□ -0.55
BEST1-201ENST00000378043 PASD1Q8IV76 773 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 ARHGEF2Q92974 986 aaKnown RBP11.64□□□□□ -0.55
BEST1-201ENST00000378043 SERPINB12Q96P63 405 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 ELAC2Q9BQ52 826 aaKnown RBP11.64□□□□□ -0.55
BEST1-201ENST00000378043 C11orf70Q9BRQ4 267 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 VPS33BQ9H267 617 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 HAUS2Q9NVX0 235 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 SLC9A2Q9UBY0 812 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 SIP14410 1827 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 EDN1P05305 212 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 VPS41P49754 854 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 LIG4P49917 911 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 BACE1P56817 501 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 NOMO3P69849 1222 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 EN1Q05925 392 aaPredicted RBP11.64□□□□□ -0.55
BEST1-201ENST00000378043 MPP2Q14168 576 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 LRRC14Q15048 493 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 MTERF2Q49AM1 385 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 NBPF12Q5TAG4 269 aaPredicted RBP11.64□□□□□ -0.55
BEST1-201ENST00000378043 CIAPIN1Q6FI81 312 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 ATL2Q8NHH9 583 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 NSUN6Q8TEA1 469 aaKnown RBP11.64□□□□□ -0.55
BEST1-201ENST00000378043 P3H4Q92791 437 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 TMEM143Q96AN5 459 aa11.64□□□□□ -0.55
BEST1-201ENST00000378043 STMN4Q9H169 189 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms