RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 CAPN10Q9HC96 672 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 PCOLCE2Q9UKZ9 415 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 CEP131Q9UPN4 1083 aa10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 USP9YO00507 2555 aaPredicted RBP10.11□□□□□ -0.79
UBE2D3-205ENST00000350435 PLXND1Q9Y4D7 1925 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 BAZ2BQ9UIF8 2168 aaKnown RBP10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 CBFA2T3O75081 653 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 TADA2AO75478 443 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 ITPKAP23677 461 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 TMPRSS3P57727 454 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 DSC1Q08554 894 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 SLFN5Q08AF3 891 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 CCDC173Q0VFZ6 552 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 TMEM196Q5HYL7 178 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 ARHGAP40Q5TG30 622 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 BROXQ5VW32 411 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 FSTL4Q6MZW2 842 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 TRMT1LQ7Z2T5 733 aaKnown RBP10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 CEP57Q86XR8 500 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 SPACA3Q8IXA5 215 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 LRRC71Q8N4P6 559 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 LNX1Q8TBB1 728 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 TTC9Q92623 222 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 MTMR8Q96EF0 704 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 SPACA7Q96KW9 195 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 ZKSCAN3Q9BRR0 538 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 TTPALQ9BTX7 342 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 UBN1Q9NPG3 1134 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 ZNF302Q9NR11 478 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 SNTG2Q9NY99 539 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 TNNQ9UQP3 1299 aa10.1□□□□□ -0.79
UBE2D3-205ENST00000350435 SF3B1O75533 1304 aaKnown RBP eCLIP10.09□□□□□ -0.792e-6■■■■■ 59.2
UBE2D3-205ENST00000350435 NFASCO94856 1347 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 NUP210Q8TEM1 1887 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 IGKV6D-21A0A0A0MT36 114 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 RIOK3O14730 519 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 GJB3O75712 270 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 ATG7O95352 703 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 EGFP01133 1207 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 ATXN1LP0C7T5 689 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 ELAVL4P26378 380 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 OR1D2P34982 312 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 UCNP55089 124 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 SPIRE1Q08AE8 756 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 RAB33AQ14088 237 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 NBR1Q14596 966 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 ITPRIPL2Q3MIP1 535 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 SPDYCQ5MJ68 293 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 CEP85Q6P2H3 762 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 MRPL10Q7Z7H8 261 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 TMEM57Q8N5G2 664 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 DAGLBQ8NCG7 672 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 FGF11Q92914 225 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 ZFYVE19Q96K21 471 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 PSMG3-AS1Q96PY0 264 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 INO80BQ9C086 356 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 GPR88Q9GZN0 384 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 MRS2Q9HD23 443 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 TOR4AQ9NXH8 423 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 MAN2B2Q9Y2E5 1009 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 UBIAD1Q9Y5Z9 338 aa10.09□□□□□ -0.79
UBE2D3-205ENST00000350435 ZMYM6O95789 1325 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 LRBAP50851 2863 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 KLRF2D3W0D1 207 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 DPYSL4O14531 572 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 ADAM12O43184 909 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 DKK1O94907 266 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 CCR2P41597 374 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 SMAD1Q15797 465 aaKnown RBP10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 FBXO43Q4G163 708 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 ANO7Q6IWH7 933 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 USP17L6PQ6QN14 398 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 CATSPER4Q7RTX7 472 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 TMC8Q8IU68 726 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 CCDC60Q8IWA6 550 aaPredicted RBP10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 FRAT1Q92837 279 aaPredicted RBP10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 RSPRY1Q96DX4 576 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 CNOT6LQ96LI5 555 aaKnown RBP10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 PNMA5Q96PV4 448 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 CDC6Q99741 560 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 PRDM16Q9HAZ2 1276 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 LRRC4CQ9HCJ2 640 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 BOD1L1Q8NFC6 3051 aa10.08□□□□□ -0.8
UBE2D3-205ENST00000350435 KNTC1P50748 2209 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 POLQO75417 2590 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 TRDMT1O14717 391 aaKnown RBP10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 DRD1P21728 446 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 ELF1P32519 619 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 CDC42EP1Q00587 391 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 PLCB2Q00722 1185 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 TNK2Q07912 1038 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 CCDC178Q5BJE1 867 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 FAM171A1Q5VUB5 890 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 HIST2H2BCQ6DN03 193 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 ABHD15Q6UXT9 468 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 RASSF3Q86WH2 238 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 TTC30AQ86WT1 665 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 ELMOD1Q8N336 334 aa10.07□□□□□ -0.8
UBE2D3-205ENST00000350435 STAG2Q8N3U4 1231 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms