RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 UBE2Q2LH0YL09 131 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 KCNN4O15554 427 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 ZC2HC1CQ53FD0 456 aaPredicted RBP17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 TOPORSQ9NS56 1045 aaPredicted RBP17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 IL1RAPL1Q9NZN1 696 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 A0A1W2PQJ5 194 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 MMP10P09238 476 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 TPP2P29144 1249 aaPredicted RBP17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 TRIM28Q13263 835 aaKnown RBP17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 STAP1Q9ULZ2 295 aa17.33■□□□□ 0.36
SH3RF1-201ENST00000284637 ABCC3O15438 1527 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 CSPG5O95196 566 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 HADHAP40939 763 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 PHKA2P46019 1235 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 DAB2P98082 770 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 TNFAIP2Q03169 654 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 KCND1Q9NSA2 647 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 PSMC3IPQ9P2W1 217 aaPredicted RBP17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 DUOXA2Q1HG44 320 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 YTHDF3Q7Z739 585 aaKnown RBP17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 COL15A1P39059 1388 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 RCOR2Q8IZ40 523 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 MAML3Q96JK9 1138 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 DCLRE1BQ9H816 532 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 ATXN3P54252 364 aaPredicted RBP17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 RAB6BQ9NRW1 208 aa17.32■□□□□ 0.36
SH3RF1-201ENST00000284637 C21orf2O43822 256 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 CD44P16070 742 aaKnown RBP17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 YWHABP31946 246 aaKnown RBP17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 ACOT2P49753 483 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 KCNA1Q09470 495 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 STX3Q13277 289 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 DDIASQ8IXT1 998 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 MSL3Q8N5Y2 521 aaKnown RBP17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 CASKIN2Q8WXE0 1202 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 MRPL4Q9BYD3 311 aaKnown RBP17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 ROPN1BQ9BZX4 212 aaPredicted RBP17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 ROPN1Q9HAT0 212 aaPredicted RBP17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 B2RBV5 119 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 APOL1O14791 398 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 ITGA8P53708 1063 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 GJB7Q6PEY0 223 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 SCN4BQ8IWT1 228 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 MTBPQ96DY7 904 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 DACH2Q96NX9 599 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 TUFT1Q9NNX1 390 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 ZC3H7BQ9UGR2 993 aaKnown RBP17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 ZHX2Q9Y6X8 837 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 HDAC4P56524 1084 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 EDRF1Q3B7T1 1238 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 WDR72Q3MJ13 1102 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 EFHC2Q5JST6 749 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 CIAPIN1Q6FI81 312 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 IFT43Q96FT9 208 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 SIK2Q9H0K1 926 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 MTMR4Q9NYA4 1195 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 MAGEA4P43358 317 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 PRAMEP78395 509 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 GPSM2P81274 684 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 CATSPER3Q86XQ3 398 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 ERGIC2Q96RQ1 377 aa17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 TSR3Q9UJK0 312 aaKnown RBP17.31■□□□□ 0.36
SH3RF1-201ENST00000284637 ARHGEF9O43307 516 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 PAPD7Q5XG87 772 aaKnown RBP17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 ULK4Q96C45 1275 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 PGBD4Q96DM1 585 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 MASTLQ96GX5 879 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 AGAP3Q96P47 875 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 OSBPL8Q9BZF1 889 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 TMBIM4Q9HC24 238 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 PCDHA10Q9Y5I2 948 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 A8MXQ7 604 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 ENO3P13929 434 aaPredicted RBP17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 MRPS15P82914 257 aaKnown RBP17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 C18orf8Q96DM3 657 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 DDX20Q9UHI6 824 aaKnown RBP17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 FOXP2O15409 715 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 TMEM253P0C7T8 217 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 CPA2P48052 419 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 TAP1Q03518 808 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 ZNF543Q08ER8 600 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 SPP2Q13103 211 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 TRIP10Q15642 601 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 IMPG1Q17R60 797 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 LDHDQ86WU2 507 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 SENP7Q9BQF6 1050 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 PCMTD2Q9NV79 361 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 XPO7Q9UIA9 1087 aaKnown RBP17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 ARHGEF37A1IGU5 675 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 AHCYL1O43865 530 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 PPARGP37231 505 aaPredicted RBP17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 DNAJC3Q13217 504 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 PTPAQ15257 358 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 LVRNQ6Q4G3 990 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 UNC45AQ9H3U1 944 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 C10orf88Q9H8K7 445 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 CAPN6Q9Y6Q1 641 aa17.3■□□□□ 0.36
SH3RF1-201ENST00000284637 CCDC78A2IDD5 438 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms