RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 DDX47Q9H0S4 455 aaKnown RBP13.92□□□□□ -0.18
COL1A1-201ENST00000225964 SEC24DO94855 1032 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-201ENST00000225964 BRAFP15056 766 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 GRIN1Q05586 938 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 GLB1LQ6UWU2 654 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 DCP1BQ8IZD4 617 aaKnown RBP13.92□□□□□ -0.18
COL1A1-201ENST00000225964 YY1AP1Q9H869 796 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 LATS2Q9NRM7 1088 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-201ENST00000225964 MYO1GB0I1T2 1018 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 NPTXRO95502 500 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 EPB42P16452 691 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 DGKDQ16760 1214 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 GOLGA7BQ2TAP0 167 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 KHDRBS2Q5VWX1 349 aaKnown RBP13.92□□□□□ -0.18
COL1A1-201ENST00000225964 EFCAB12Q6NXP0 572 aa13.92□□□□□ -0.18
COL1A1-201ENST00000225964 FAM84BQ96KN1 310 aaPredicted RBP13.92□□□□□ -0.18
COL1A1-201ENST00000225964 E2F8A0AVK6 867 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 GOLGA8RI6L899 631 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 GGCXP38435 758 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 FCGRTP55899 365 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 UBE3AQ05086 875 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 ARID5BQ14865 1188 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 EMC2Q15006 297 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 C10orf120Q5SQS8 335 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 FAM180AQ6UWF9 173 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 DHX40Q8IX18 779 aaKnown RBP13.91□□□□□ -0.18
COL1A1-201ENST00000225964 RCOR2Q8IZ40 523 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 PTPRN2Q92932 1015 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 TIPINQ9BVW5 301 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 APOL5Q9BWW9 433 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 RAD18Q9NS91 495 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 ZNF70Q9UC06 446 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-201ENST00000225964 GRAP2O75791 330 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 IGKV5-2P06315 115 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 HDAC4P56524 1084 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 C11orf74Q86VG3 221 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 TBC1D16Q8TBP0 767 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 TSPAN17Q96FV3 270 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 GSG1L2A8MUP6 293 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 AP3B1O00203 1094 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 KRT4P19013 534 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 NCALDP61601 193 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 CEP55Q53EZ4 464 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 ZRANB3Q5FWF4 1079 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 OOSP2Q86WS3 158 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 OSBPL5Q9H0X9 879 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-201ENST00000225964 TNS3Q68CZ2 1445 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 ZCCHC11Q5TAX3 1644 aaKnown RBP13.91□□□□□ -0.18
COL1A1-201ENST00000225964 UBXN8O00124 270 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 MZF1P28698 734 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-201ENST00000225964 PPP2R2AP63151 447 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 NCOA4Q13772 614 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 COG1Q8WTW3 980 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 BHMTQ93088 406 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 TEX13BQ9BXU2 312 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 GPR63Q9BZJ6 419 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 CATSPERBQ9H7T0 1116 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 SPATS2LQ9NUQ6 558 aaKnown RBP13.91□□□□□ -0.18
COL1A1-201ENST00000225964 NDE1Q9NXR1 346 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 PSMD14O00487 310 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 PDHA1P08559 390 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 XKR3Q5GH77 459 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 MTHFD1LQ6UB35 978 aa13.91□□□□□ -0.18
COL1A1-201ENST00000225964 MB21D2Q8IYB1 491 aaPredicted RBP13.91□□□□□ -0.18
COL1A1-201ENST00000225964 FAM32AQ9Y421 112 aaKnown RBP13.91□□□□□ -0.18
COL1A1-201ENST00000225964 CETPP11597 493 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 GYS2P54840 703 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 HUNKP57058 714 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 XPO7Q9UIA9 1087 aaKnown RBP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 SLC25A13Q9UJS0 675 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 MAN1A2O60476 641 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 GUCA1CO95843 209 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 ABCE1P61221 599 aaKnown RBP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 GPRC5AQ8NFJ5 357 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 NUDT12Q9BQG2 462 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 FAM49BQ9NUQ9 324 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 GIMAP4Q9NUV9 329 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 ARHGAP26Q9UNA1 814 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 KDM6AO15550 1401 aaPredicted RBP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 TARSL2A2RTX5 802 aaKnown RBP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 ARHGEF9O43307 516 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 MAP3K10Q02779 954 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 ATF7IP2Q5U623 682 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 TDRD10Q5VZ19 366 aaKnown RBP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 ZNF555Q8NEP9 628 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 MYCBPQ99417 103 aaPredicted RBP13.9□□□□□ -0.18
COL1A1-201ENST00000225964 SENP7Q9BQF6 1050 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 PFASO15067 1338 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 WDR19Q8NEZ3 1342 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 FAM187AA6NFU0 413 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 PDGFRAP16234 1089 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 SLC1A1P43005 524 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 SGO1Q5FBB7 561 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 STRIP1Q5VSL9 837 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 RNF180Q86T96 592 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 SEPT1Q8WYJ6 367 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 C17orf80Q9BSJ5 609 aa13.9□□□□□ -0.18
COL1A1-201ENST00000225964 H0Y626 953 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms