RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 KIF19Q2TAC6 998 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 BTBD8Q5XKL5 378 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
NOD1-201ENST00000222823 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 AFG1LQ8WV93 481 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 ALKBH8Q96BT7 664 aaKnown RBP12.15□□□□□ -0.46
NOD1-201ENST00000222823 ATG4CQ96DT6 458 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 DRC3Q9H069 523 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 IL17RBQ9NRM6 502 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 SCOCQ9UIL1 159 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 ZFP69BQ9UJL9 534 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 KCPQ6ZWJ8 1503 aa12.15□□□□□ -0.46
NOD1-201ENST00000222823 APOEP02649 317 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 LCP1P13796 627 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 FGFR4P22455 802 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 NOP14P78316 857 aaKnown RBP12.15□□□□□ -0.47
NOD1-201ENST00000222823 DRP2Q13474 957 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 STILQ15468 1287 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 NBPF9Q3BBW0 867 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 RNF219Q5W0B1 726 aaPredicted RBP12.15□□□□□ -0.47
NOD1-201ENST00000222823 ACAD11Q709F0 780 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 RCOR2Q8IZ40 523 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 LRRC43Q8N309 656 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 NOA1Q8NC60 698 aaKnown RBP12.15□□□□□ -0.47
NOD1-201ENST00000222823 TTC8Q8TAM2 541 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 GTSE1Q9NYZ3 720 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.47
NOD1-201ENST00000222823 HLA-DRAP01903 254 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 CDC42EP1Q00587 391 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 SENP7Q9BQF6 1050 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 TMEM117Q9H0C3 514 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 KLHL11Q9NVR0 708 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 NOP53Q9NZM5 478 aaKnown RBP12.14□□□□□ -0.47
NOD1-201ENST00000222823 SENP1Q9P0U3 644 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 FAF1Q9UNN5 650 aaPredicted RBP12.14□□□□□ -0.47
NOD1-201ENST00000222823 PPP1R37O75864 691 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 FGRP09769 529 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 KITP10721 976 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 HSD17B4P51659 736 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 NFIAQ12857 509 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 KLHDC7AQ5VTJ3 777 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 XRRA1Q6P2D8 792 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 TRIM51Q9BSJ1 452 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
NOD1-201ENST00000222823 TARS2Q9BW92 718 aaKnown RBP12.14□□□□□ -0.47
NOD1-201ENST00000222823 ANKEF1Q9NU02 776 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 THEGQ9P2T0 379 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 ALG6Q9Y672 507 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 CYP11B2P19099 503 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 RGS7P49802 495 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 FUT2Q10981 343 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 SMAD1Q15797 465 aaKnown RBP12.14□□□□□ -0.47
NOD1-201ENST00000222823 STYK1Q6J9G0 422 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 TRAPPC11Q7Z392 1133 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 C9orf72Q96LT7 481 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 SPON1Q9HCB6 807 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 TMEM8AQ9HCN3 771 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 RBM12Q9NTZ6 932 aaKnown RBP12.14□□□□□ -0.47
NOD1-201ENST00000222823 ZFATQ9P243 1243 aa12.14□□□□□ -0.47
NOD1-201ENST00000222823 PIK3R2O00459 728 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 APOL1O14791 398 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 SLC37A4O43826 429 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 DIAPH2O60879 1101 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 CDH16O75309 829 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 APRTP07741 180 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 TMEM253P0C7T8 217 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 CPB1P15086 417 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 RFC5P40937 340 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 KLK7P49862 253 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 GMPSP49915 693 aaPredicted RBP12.13□□□□□ -0.47
NOD1-201ENST00000222823 SESN2P58004 480 aaPredicted RBP12.13□□□□□ -0.47
NOD1-201ENST00000222823 GUCY1A3Q02108 690 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 TMEM132DQ14C87 1099 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 ELMSAN1Q6PJG2 1045 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.478e-6■■■■□ 19.3
NOD1-201ENST00000222823 MYCBPQ99417 103 aaPredicted RBP12.13□□□□□ -0.47
NOD1-201ENST00000222823 EPAS1Q99814 870 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 TRIM62Q9BVG3 475 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 RTFDC1Q9BY42 306 aaPredicted RBP12.13□□□□□ -0.47
NOD1-201ENST00000222823 ETNK1Q9HBU6 452 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 MYOZ2Q9NPC6 264 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 IGSF9BQ9UPX0 1349 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 SMIM22K7EJ46 135 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 PPP1R12AO14974 1030 aaPredicted RBP12.13□□□□□ -0.47
NOD1-201ENST00000222823 P4HA2O15460 535 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 HOXD10P28358 340 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 PHEXP78562 749 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 MORF4L2Q15014 288 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 SYDE1Q6ZW31 735 aaPredicted RBP12.13□□□□□ -0.47
NOD1-201ENST00000222823 ZBTB18Q99592 522 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 OSBPL8Q9BZF1 889 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 SP110Q9HB58 689 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 CHUKO15111 745 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 MSH4O15457 936 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 ATP9BO43861 1147 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 SNX2O60749 519 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 SPAG7O75391 227 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 ITIH2P19823 946 aa12.13□□□□□ -0.47
NOD1-201ENST00000222823 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms