RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	FAR8	Q05040	523 aa		0.7	□□□□□ -2.3
PRP16	YKR086W	YLR173W	Q06247	608 aa		0.7	□□□□□ -2.3
PRP16	YKR086W	YPL257W	Q08974	193 aa		0.7	□□□□□ -2.3
PRP16	YKR086W	YOR114W	Q12219	294 aa		0.7	□□□□□ -2.3
PRP16	YKR086W	PRM7	Q12459	698 aa		0.7	□□□□□ -2.3
PRP16	YKR086W	HTB1	P02293	131 aa	Known RBP	0.69	□□□□□ -2.3
PRP16	YKR086W	HTB2	P02294	131 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	HEM4	P06174	275 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	YEL043W	P32618	956 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	YKL102C	P34249	101 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	YPT52	P36018	234 aa	Known RBP	0.69	□□□□□ -2.3
PRP16	YKR086W	YKL070W	P36087	169 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	PEX17	P40155	199 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	AIM20	P40451	204 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	AGX1	P43567	385 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	ABM1	P47146	123 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	YGL159W	P53110	370 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	PGA2	P53903	129 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	MET31	Q03081	177 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	NAT4	Q04751	285 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	YOR012W	Q12351	137 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	SIR2	P06700	562 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	CHA1	P25379	360 aa	Known RBP	0.69	□□□□□ -2.3
PRP16	YKR086W	VPH2	P32341	215 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	RPT5	P33297	434 aa	Known RBP	0.69	□□□□□ -2.3
PRP16	YKR086W	TPO5	P36029	618 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	YBR063C	P38083	404 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	SIP3	P38717	1229 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	EDC2	P40023	145 aa	Predicted RBP	0.69	□□□□□ -2.3
PRP16	YKR086W	RRT13	P40042	185 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	RRG9	P40156	214 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	FMC1	P40491	155 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	FIS1	P40515	155 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	ADO1	P47143	340 aa	Known RBP	0.69	□□□□□ -2.3
PRP16	YKR086W	SEC10	Q06245	871 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	YLR030W	Q07967	263 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	YLR126C	Q12288	251 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	CMC2	Q3E7A4	109 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	YIL046W-A	Q3E7Z4	54 aa		0.69	□□□□□ -2.3
PRP16	YKR086W	DOA4	P32571	926 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	TOA2	P32774	122 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	PTC1	P35182	281 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	YER135C	P40082	130 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	SNZ3	P43545	298 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	FMP33	P46998	180 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	GTO1	P48239	356 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	NUP57	P48837	541 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	TOM22	P49334	152 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	SNZ2	P53824	298 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	YPL113C	Q02961	396 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	PLP1	Q04004	230 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	YDL114W	Q07530	308 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	PAM18	Q07914	168 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	YLR412C-A	Q3E742	68 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	MEC1	P38111	2368 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	CBP6	P07253	162 aa	Predicted RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	RPB5	P20434	215 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	GIT1	P25346	518 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	SUA7	P29055	345 aa	Predicted RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	AGA2	P32781	87 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	SFC1	P33303	322 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	PRP18	P33411	251 aa	Predicted RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	LRP1	P38801	184 aa	Known RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	FCY21	P40039	528 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	GDS1	P41913	522 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	ALB1	P47019	175 aa	Predicted RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	CWC23	P52868	283 aa	Predicted RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	ALG9	P53868	555 aa	Known RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	YNL143C	P53908	130 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	API2	Q04413	109 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	CTS2	Q06350	511 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	RDS3	Q06835	107 aa	Predicted RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	IES4	Q08561	116 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	ATO3	Q12359	275 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	GCN1	P33892	2672 aa	Known RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	NMT1	P14743	455 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	ARO3	P14843	370 aa	Known RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	PET9	P18239	318 aa	Known RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	SPS19	P32573	292 aa	Known RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	YKL187C	P34231	750 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	JEN1	P36035	616 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	MCR1	P36060	302 aa	Known RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	YBL081W	P38180	368 aa	Known RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	LDB7	P38210	180 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	HIS2	P38635	335 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	RRN9	P53437	365 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	YNL247W	P53852	767 aa	Known RBP	0.68	□□□□□ -2.3
PRP16	YKR086W	PET191	Q02772	108 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	YLH47	Q06493	454 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	YOR376W	Q08900	122 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	GEP5	Q12393	293 aa		0.68	□□□□□ -2.3
PRP16	YKR086W	FLO9	P39712	1322 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	RPL23A	P0CX41	137 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	RPL23B	P0CX42	137 aa	Known RBP	0.67	□□□□□ -2.3
PRP16	YKR086W	DEP1	P31385	405 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	SPO23	P33757	523 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	AIM29	P36154	155 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	FIG1	P38224	298 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	PRM9	P39551	298 aa		0.67	□□□□□ -2.3
PRP16	YKR086W	SPO73	P40031	143 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 200.2 ms