RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 MYBL2P10244 700 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 RALAP11233 206 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 EVX2Q03828 476 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 Q3C1V9 767 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 NUDCD3Q8IVD9 361 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 DDX27Q96GQ7 796 aaKnown RBP17.62■□□□□ 0.41
SCARB2-210ENST00000638567 TSC22D3Q99576 134 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 TIPINQ9BVW5 301 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 MRPL4Q9BYD3 311 aaKnown RBP17.62■□□□□ 0.41
SCARB2-210ENST00000638567 VPS11Q9H270 941 aa17.62■□□□□ 0.41
SCARB2-210ENST00000638567 SMG5Q9UPR3 1016 aaKnown RBP17.62■□□□□ 0.41
SCARB2-210ENST00000638567 TRPA1O75762 1119 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 SGPL1O95470 568 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 HSPA4LO95757 839 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 SEPT6Q14141 434 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 DPP9Q86TI2 863 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 HDAC11Q96DB2 347 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 AGBL1Q96MI9 1066 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 KLF6Q99612 283 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-210ENST00000638567 CYP26B1Q9NR63 512 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 ZWINTO95229 277 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 HLA-DRAP01903 254 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 EIF3EP60228 445 aaKnown RBP17.61■□□□□ 0.41
SCARB2-210ENST00000638567 NOP14P78316 857 aaKnown RBP17.61■□□□□ 0.41
SCARB2-210ENST00000638567 ROR1Q01973 937 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 EAPPQ56P03 285 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-210ENST00000638567 C1orf228Q6PIY5 440 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 RCOR2Q8IZ40 523 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 SIX6OS1Q8N1H7 587 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 SENP7Q9BQF6 1050 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 OSBPL1AQ9BXW6 950 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 FAM49AQ9H0Q0 323 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-210ENST00000638567 RPAP3Q9H6T3 665 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-210ENST00000638567 NPHS2Q9NP85 383 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 JCADQ9P266 1359 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 RIMS1Q86UR5 1692 aaKnown RBP17.61■□□□□ 0.41
SCARB2-210ENST00000638567 FOXP2O15409 715 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 ELF1P32519 619 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 SREBF1P36956 1147 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 WDR72Q3MJ13 1102 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 MOXD1Q6UVY6 613 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 CBWD2Q8IUF1 395 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 KCTD17Q8N5Z5 321 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 FAM167AQ96KS9 214 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 MCEEQ96PE7 176 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 GPRC5CQ9NQ84 441 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 SH3BGRP55822 239 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-210ENST00000638567 NCOA4Q13772 614 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 LRP10Q7Z4F1 713 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 CEP120Q8N960 986 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 HOXC10Q9NYD6 342 aa17.61■□□□□ 0.41
SCARB2-210ENST00000638567 ZBTB12Q9Y330 459 aaPredicted RBP17.61■□□□□ 0.41
SCARB2-210ENST00000638567 COL23A1Q86Y22 540 aaPredicted RBP17.6■□□□□ 0.41
SCARB2-210ENST00000638567 SLC20A1Q8WUM9 679 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 RPS6KC1Q96S38 1066 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 UNC45AQ9H3U1 944 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 CXorf56Q9H5V9 222 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 PJA2O43164 708 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 CIITAP33076 1130 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 FNTAP49354 379 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 CYP2W1Q8TAV3 490 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 ATP8B4Q8TF62 1192 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 TNS2Q63HR2 1409 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 ANKRD26Q9UPS8 1709 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 IGF2BP3O00425 579 aaKnown RBP eCLIP17.6■□□□□ 0.41
SCARB2-210ENST00000638567 NR3C2P08235 984 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 DNAJC3Q13217 504 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 CAPRIN2Q6IMN6 1127 aaKnown RBP17.6■□□□□ 0.41
SCARB2-210ENST00000638567 CCDC117Q8IWD4 279 aaPredicted RBP17.6■□□□□ 0.41
SCARB2-210ENST00000638567 ACER1Q8TDN7 264 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 EPS15L1Q9UBC2 864 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 MYO5BQ9ULV0 1848 aa17.6■□□□□ 0.41
SCARB2-210ENST00000638567 SYF2O95926 243 aaKnown RBP17.59■□□□□ 0.41
SCARB2-210ENST00000638567 PBX1P40424 430 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 ART3Q13508 389 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 XKR3Q5GH77 459 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 RNF149Q8NC42 400 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 LRGUKQ96M69 825 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 CCDC68Q9H2F9 335 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 ACAD9Q9H845 621 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 VCX3AQ9NNX9 186 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 REXO2Q9Y3B8 237 aaKnown RBP17.59■□□□□ 0.41
SCARB2-210ENST00000638567 AFF2P51816 1311 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 COG2Q14746 738 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 HSP90AA5PQ58FG0 334 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 MIIPQ5JXC2 388 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 SEMA4AQ9H3S1 761 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 SCAF8Q9UPN6 1271 aaKnown RBP17.59■□□□□ 0.41
SCARB2-210ENST00000638567 MST1RQ04912 1400 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 ARP10275 920 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 TAL1P17542 331 aaPredicted RBP17.59■□□□□ 0.41
SCARB2-210ENST00000638567 BZW1Q7L1Q6 419 aaKnown RBP17.59■□□□□ 0.41
SCARB2-210ENST00000638567 PIP4K2CQ8TBX8 421 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 SLC35C1Q96A29 364 aa17.59■□□□□ 0.41
SCARB2-210ENST00000638567 GJD4Q96KN9 370 aaPredicted RBP17.59■□□□□ 0.41
SCARB2-210ENST00000638567 KLHL8Q9P2G9 620 aaPredicted RBP17.59■□□□□ 0.41
SCARB2-210ENST00000638567 BCL9O00512 1426 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 SRGAP2BP0DMP2 458 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 RARGP13631 454 aa17.58■□□□□ 0.41
SCARB2-210ENST00000638567 MTMR2Q13614 643 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms