RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 CUL4BQ13620 913 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 PDCD11Q14690 1871 aaKnown RBP18.53■□□□□ 0.56
LIN28B-202ENST00000635857 COL19A1Q14993 1142 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 PTPN14Q15678 1187 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 CTC1Q2NKJ3 1217 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 XKR4Q5GH76 650 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 KANK3Q6NY19 840 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 LLGL2Q6P1M3 1020 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 ARMCX5Q6P1M9 558 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 SLC39A4Q6P5W5 647 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 ELMSAN1Q6PJG2 1045 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 DCLRE1AQ6PJP8 1040 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 GRAMD1CQ8IYS0 662 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 NOC3LQ8WTT2 800 aaKnown RBP18.53■□□□□ 0.56
LIN28B-202ENST00000635857 AUTS2Q8WXX7 1259 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 CASP10Q92851 521 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 HAPLN2Q9GZV7 340 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 CHMP5Q9NZZ3 219 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 UBQLN1Q9UMX0 589 aaKnown RBP18.53■□□□□ 0.56
LIN28B-202ENST00000635857 NUB1Q9Y5A7 615 aa18.53■□□□□ 0.56
LIN28B-202ENST00000635857 FAM237AA0A1B0GTK4 181 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 PODXLO00592 558 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 KIAA0391O15091 583 aaKnown RBP18.52■□□□□ 0.56
LIN28B-202ENST00000635857 LINC01565O15544 149 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 ADH1AP07327 375 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 GARTP22102 1010 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 KLRC2P26717 231 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 CASP1P29466 404 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 RPL9P32969 192 aaKnown RBP18.52■□□□□ 0.56
LIN28B-202ENST00000635857 KCNQ1P51787 676 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 CLCNKBP51801 687 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 NAB2Q15742 525 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 SLC10A6Q3KNW5 377 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 PDXDC1Q6P996 788 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 PAAF1Q9BRP4 392 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 VN1R3Q9BXE9 311 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 CXCL16Q9H2A7 254 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 GOLGA2P5Q9HBQ8 144 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.52■□□□□ 0.56
LIN28B-202ENST00000635857 CACNG4Q9UBN1 327 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 CD207Q9UJ71 328 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 CPSF3Q9UKF6 684 aaKnown RBP18.52■□□□□ 0.56
LIN28B-202ENST00000635857 STYXL1Q9Y6J8 313 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 REV3LO60673 3130 aa18.52■□□□□ 0.56
LIN28B-202ENST00000635857 TTC26A0AVF1 554 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 TISP43B9A030 160 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 F8W810 466 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 TMEM189-UBE2V1I3L0A0 370 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 ZNF202O95125 648 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 ACOT2P49753 483 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 KCNA1Q09470 495 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 ENOX2Q16206 610 aaKnown RBP18.51■□□□□ 0.55
LIN28B-202ENST00000635857 UPP1Q16831 310 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 PTCRAQ6ISU1 281 aaPredicted RBP18.51■□□□□ 0.55
LIN28B-202ENST00000635857 KRBA2Q6ZNG9 492 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 HS2ST1Q7LGA3 356 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 CEP57Q86XR8 500 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 BEST2Q8NFU1 509 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 HPS3Q969F9 1004 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 ZMAT2Q96NC0 199 aaKnown RBP18.51■□□□□ 0.55
LIN28B-202ENST00000635857 GPR62Q9BZJ7 368 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 DPP7Q9UHL4 492 aa18.51■□□□□ 0.55
LIN28B-202ENST00000635857 HOOK1Q9UJC3 728 aaKnown RBP18.51■□□□□ 0.55
LIN28B-202ENST00000635857 BARX2Q9UMQ3 279 aaPredicted RBP18.51■□□□□ 0.55
LIN28B-202ENST00000635857 LACTBL1A8MY62 500 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 CLASP2O75122 1294 aaKnown RBP18.5■□□□□ 0.55
LIN28B-202ENST00000635857 TBX10O75333 385 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 KIF20AO95235 890 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 IL18RAPO95256 599 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 POU5F1Q01860 360 aaKnown RBP18.5■□□□□ 0.55
LIN28B-202ENST00000635857 DSG1Q02413 1049 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 PSMD2Q13200 908 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 TMEM132DQ14C87 1099 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 CLUL1Q15846 466 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 FAM171A1Q5VUB5 890 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 RIN2Q8WYP3 895 aaPredicted RBP18.5■□□□□ 0.55
LIN28B-202ENST00000635857 FAM213AQ9BRX8 229 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 TTPALQ9BTX7 342 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 FGFBP2Q9BYJ0 223 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 GOLPH3LQ9H4A5 285 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 ASB7Q9H672 318 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 SLC39A2Q9NP94 309 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 DZANK1Q9NVP4 752 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 HCFC2Q9Y5Z7 792 aa18.5■□□□□ 0.55
LIN28B-202ENST00000635857 FAM189A1O60320 539 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 RPN1P04843 607 aaKnown RBP18.49■□□□□ 0.55
LIN28B-202ENST00000635857 CYP3A5P20815 502 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 MCM4P33991 863 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 SOX4Q06945 474 aaPredicted RBP18.49■□□□□ 0.55
LIN28B-202ENST00000635857 SPAG1Q07617 926 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 ZBTB41Q5SVQ8 909 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.49■□□□□ 0.55
LIN28B-202ENST00000635857 TAS1R1Q7RTX1 841 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 NELFCDQ8IXH7 590 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 GPR65Q8IYL9 337 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 RNF168Q8IYW5 571 aaPredicted RBP18.49■□□□□ 0.55
LIN28B-202ENST00000635857 ZNF507Q8TCN5 953 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 ADAMTS19Q8TE59 1207 aa18.49■□□□□ 0.55
LIN28B-202ENST00000635857 C18orf25Q96B23 403 aaPredicted RBP18.49■□□□□ 0.55
LIN28B-202ENST00000635857 SAAL1Q96ER3 474 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms