RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 SLC35B2Q8TB61 432 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 CCHCR1Q8TD31 782 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 NUP133Q8WUM0 1156 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 MTMR8Q96EF0 704 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 BOD1Q96IK1 185 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 TOR3AQ9H497 397 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 PCDH12Q9NPG4 1184 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 DMRT3Q9NQL9 472 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 CALCOCO1Q9P1Z2 691 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.41□□□□□ -1.7
SRP54-214ENST00000630962 INTUQ9ULD6 942 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 NEU2Q9Y3R4 380 aa4.41□□□□□ -1.7
SRP54-214ENST00000630962 CFAP20Q9Y6A4 193 aaKnown RBP4.41□□□□□ -1.7
SRP54-214ENST00000630962 MYBBP1AQ9BQG0 1328 aaKnown RBP4.41□□□□□ -1.7
SRP54-214ENST00000630962 CDKL5O76039 1030 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 NDUFA10O95299 355 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 ARIH2O95376 493 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 CFIP05156 583 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 HKR1P10072 659 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 CKBP12277 381 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 NCLP19338 710 aaKnown RBP4.4□□□□□ -1.71
SRP54-214ENST00000630962 TGM1P22735 817 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 ALDH1A3P47895 512 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 ADKP55263 362 aaKnown RBP4.4□□□□□ -1.71
SRP54-214ENST00000630962 MTM1Q13496 603 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 MTMR1Q13613 665 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 SMN1Q16637 294 aaKnown RBP4.4□□□□□ -1.71
SRP54-214ENST00000630962 ERCC6LQ2NKX8 1250 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 PDCD4Q53EL6 469 aaKnown RBP4.4□□□□□ -1.71
SRP54-214ENST00000630962 THEMIS2Q5TEJ8 643 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 ZNF529Q6P280 563 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 TTC7BQ86TV6 843 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 SYT12Q8IV01 421 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 MAPKAPK5Q8IW41 473 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 RHOT1Q8IXI2 618 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 COLGALT2Q8IYK4 626 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 CBARPQ8N350 705 aaPredicted RBP4.4□□□□□ -1.71
SRP54-214ENST00000630962 RNF169Q8NCN4 708 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 OR56A1Q8NGH5 318 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 NRG4Q8WWG1 115 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 JADE3Q92613 823 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 PNKPQ96T60 521 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 TTPALQ9BTX7 342 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 FAM126AQ9BYI3 521 aaPredicted RBP4.4□□□□□ -1.71
SRP54-214ENST00000630962 C11orf54Q9H0W9 315 aaPredicted RBP4.4□□□□□ -1.71
SRP54-214ENST00000630962 SERHL2Q9H4I8 314 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 TMEM74BQ9NUR3 256 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 GNL3LQ9NVN8 582 aaKnown RBP4.4□□□□□ -1.71
SRP54-214ENST00000630962 DKK2Q9UBU2 259 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 KCNE5Q9UJ90 142 aa4.4□□□□□ -1.71
SRP54-214ENST00000630962 ING1Q9UK53 422 aaPredicted RBP4.4□□□□□ -1.71
SRP54-214ENST00000630962 A0A1B0GTW7 788 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 PIPSLA2A3N6 862 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 MYADML2A6NDP7 307 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 GABRDO14764 452 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 PPFIA2O75334 1257 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 ANXA1P04083 346 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 NR4A1P22736 598 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 IARSP41252 1262 aaKnown RBP4.39□□□□□ -1.71
SRP54-214ENST00000630962 RECQLP46063 649 aaPredicted RBP4.39□□□□□ -1.71
SRP54-214ENST00000630962 SLC6A9P48067 706 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 SEPT2Q15019 361 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 PTPROQ16827 1216 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 TSHZ3Q63HK5 1081 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 RPUSD2Q8IZ73 545 aaKnown RBP4.39□□□□□ -1.71
SRP54-214ENST00000630962 MIER2Q8N344 545 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 CPEB3Q8NE35 698 aaKnown RBP4.39□□□□□ -1.71
SRP54-214ENST00000630962 FUBP1Q96AE4 644 aaKnown RBP4.39□□□□□ -1.71
SRP54-214ENST00000630962 PHACTR3Q96KR7 559 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 GALNT9Q9HCQ5 603 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 HOMER2Q9NSB8 354 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 KLHL11Q9NVR0 708 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 DMTF1Q9Y222 760 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 SIK3Q9Y2K2 1263 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 NOP58Q9Y2X3 529 aaKnown RBP4.39□□□□□ -1.71
SRP54-214ENST00000630962 DMRT1Q9Y5R6 373 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 ACTL7AQ9Y615 435 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 WASHC2CQ9Y4E1 1318 aa4.39□□□□□ -1.71
SRP54-214ENST00000630962 CENPVL1A0A0U1RR11 272 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 MARCH11A6NNE9 402 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 ZNF185O15231 689 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 SLC16A6O15403 523 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 HAUS5O94927 633 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 SNUPNO95149 360 aaKnown RBP4.38□□□□□ -1.71
SRP54-214ENST00000630962 GPANK1O95872 356 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 MT-CO1P00395 513 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 CDKN1CP49918 316 aaPredicted RBP4.38□□□□□ -1.71
SRP54-214ENST00000630962 ATP8B2P98198 1209 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 RESTQ13127 1097 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 CSRP2Q16527 193 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 PTPN21Q16825 1174 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 PABPC1LQ4VXU2 614 aaKnown RBP4.38□□□□□ -1.71
SRP54-214ENST00000630962 METRNLQ641Q3 311 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 GADL1Q6ZQY3 521 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 ZNF627Q7L945 461 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 TMEM132CQ8N3T6 1108 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 PPM1NQ8N819 430 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 IL17RDQ8NFM7 739 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 STON2Q8WXE9 905 aa4.38□□□□□ -1.71
SRP54-214ENST00000630962 SLC2A13Q96QE2 648 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 266 ms