RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 ZKSCAN4Q969J2 545 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-206ENST00000612899 RMDN2Q96LZ7 410 aa13.22□□□□□ -0.29
TNFAIP3-206ENST00000612899 POLR3CQ9BUI4 534 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP3-206ENST00000612899 A0A087X0T9 212 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 CCDC195A0A1B0GUA6 201 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 MAFGO15525 162 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 GRAP2O75791 330 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 PDGFRBP09619 1106 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 FAM228BP0C875 321 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 RBP5P82980 135 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 SGSM1Q2NKQ1 1148 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 FBXO41Q8TF61 875 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 MCEEQ96PE7 176 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 SPON1Q9HCB6 807 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 GPRC5CQ9NQ84 441 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 KBTBD4Q9NVX7 518 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 CTSHP09668 335 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 CARSP49589 748 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 CACNB2Q08289 660 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 MTM1Q13496 603 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 TAF11Q15544 211 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 TRAIPQ9BWF2 469 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 APOBEC2Q9Y235 224 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 KIAA1210Q9ULL0 1709 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 A0A1W2PQJ5 194 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 C6orf222P0C671 652 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 PAPOLAP51003 745 aaKnown RBP13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 PKN1Q16512 942 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 NYAP1Q6ZVC0 841 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 COL23A1Q86Y22 540 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 OR6P1Q8NGX9 317 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 EFHD1Q9BUP0 239 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 TMEM8AQ9HCN3 771 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 USH1CQ9Y6N9 552 aa13.21□□□□□ -0.29
TNFAIP3-206ENST00000612899 MAP2P11137 1827 aaKnown RBP13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 GOLGA8RI6L899 631 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 GNGT2O14610 69 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 RAD51CO43502 376 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 SLC26A4O43511 780 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 KRT10P13645 584 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 SESN2P58004 480 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 ACTR2P61160 394 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 ERVK-24P63145 666 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 ST3GAL1Q11201 340 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 TAF1CQ15572 869 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 SLC15A2Q16348 729 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 CDKL3Q8IVW4 592 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 REXO1L1PQ8IX06 675 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 ALKBH8Q96BT7 664 aaKnown RBP13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 ZDHHC15Q96MV8 337 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 LRRC37BQ96QE4 947 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 SENP7Q9BQF6 1050 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 ZBED2Q9BTP6 218 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 ALG13Q9NP73 1137 aaKnown RBP13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 EHD2Q9NZN4 543 aa13.21□□□□□ -0.3
TNFAIP3-206ENST00000612899 IGSF9BQ9UPX0 1349 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 TCRBV5S4A2TA0A5A2 114 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 APRTP07741 180 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 CAP2P40123 477 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 TMEM132DQ14C87 1099 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 OR2W6PQ8NHA6 318 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 ANKRD7Q92527 254 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 CELF4Q9BZC1 486 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 UNC45AQ9H3U1 944 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 HACL1Q9UJ83 578 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 DUSP10Q9Y6W6 482 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 NVLO15381 856 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 ATP9BO43861 1147 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 ARP10275 920 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 MX2P20592 715 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 TYK2P29597 1187 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 COPS2P61201 443 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 TTI2Q6NXR4 508 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 ATXN7L3BQ96GX2 97 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 RBM15Q96T37 977 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■■■□ 19.4
TNFAIP3-206ENST00000612899 FUCA2Q9BTY2 467 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 ANKEF1Q9NU02 776 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 H3BRJ5 948 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 TRPA1O75762 1119 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 CHEK2O96017 543 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 TMEM253P0C7T8 217 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 CASP4P49662 377 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 PSMD7P51665 324 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 GRAMD1BQ3KR37 738 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 HABP4Q5JVS0 413 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 LRRC43Q8N309 656 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 AGBL3Q8NEM8 1001 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 OSBPL8Q9BZF1 889 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 FAM49BQ9NUQ9 324 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 PPP1R37O75864 691 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 TAC1P20366 129 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 YWHAHQ04917 246 aaPredicted RBP13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 SEZ6Q53EL9 994 aa13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 EARS2Q5JPH6 523 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 RBM43Q6ZSC3 357 aaKnown RBP13.2□□□□□ -0.3
TNFAIP3-206ENST00000612899 NUDCD3Q8IVD9 361 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms