RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 PLEKHA5Q9HAU0 1116 aa21.85■■□□□ 1.09
SSBP4-210ENST00000601444 SPTBN5Q9NRC6 3674 aaKnown RBP21.85■■□□□ 1.09
SSBP4-210ENST00000601444 CARNS1A5YM72 827 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 CXCL14O95715 111 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 ADRB2P07550 413 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 GARTP22102 1010 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 NRIP1P48552 1158 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 PPP2R3AQ06190 1150 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 PSMD2Q13200 908 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 B3GALT6Q96L58 329 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 TUBGCP4Q9UGJ1 667 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 ADAM28Q9UKQ2 775 aa21.84■■□□□ 1.09
SSBP4-210ENST00000601444 CLIC2O15247 247 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 LINC01565O15544 149 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 TADA2AO75478 443 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 RHOBTB3O94955 611 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 CA8P35219 290 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 WNT7BP56706 349 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 ZBTB6Q15916 424 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 UPP1Q16831 310 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 BMT2Q1RMZ1 405 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 PDE12Q6L8Q7 609 aaKnown RBP21.83■■□□□ 1.09
SSBP4-210ENST00000601444 ARMCX5Q6P1M9 558 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 CD300LGQ6UXG3 332 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 RNF168Q8IYW5 571 aaPredicted RBP21.83■■□□□ 1.09
SSBP4-210ENST00000601444 MRPL43Q8N983 215 aaKnown RBP21.83■■□□□ 1.09
SSBP4-210ENST00000601444 C3orf58Q8NDZ4 430 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 NOC3LQ8WTT2 800 aaKnown RBP21.83■■□□□ 1.09
SSBP4-210ENST00000601444 KIF12Q96FN5 646 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 TIGD1Q96MW7 591 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 TLE6Q9H808 572 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 NGRNQ9NPE2 291 aaKnown RBP21.83■■□□□ 1.09
SSBP4-210ENST00000601444 AGPAT3Q9NRZ7 376 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 SLC38A7Q9NVC3 462 aa21.83■■□□□ 1.09
SSBP4-210ENST00000601444 TRIP11Q15643 1979 aa21.83■■□□□ 1.08
SSBP4-210ENST00000601444 UBE4BO95155 1302 aa21.82■■□□□ 1.08
SSBP4-210ENST00000601444 C2orf71A6NGG8 1288 aa21.82■■□□□ 1.08
SSBP4-210ENST00000601444 SOD2P04179 222 aa21.82■■□□□ 1.08
SSBP4-210ENST00000601444 CTSAP10619 480 aa21.82■■□□□ 1.08
SSBP4-210ENST00000601444 GUCY2FP51841 1108 aa21.82■■□□□ 1.08
SSBP4-210ENST00000601444 RBM10P98175 930 aaKnown RBP21.82■■□□□ 1.08
SSBP4-210ENST00000601444 TFF2Q03403 129 aa21.82■■□□□ 1.08
SSBP4-210ENST00000601444 SMC1AQ14683 1233 aaKnown RBP21.82■■□□□ 1.08
SSBP4-210ENST00000601444 KNOP1Q1ED39 458 aaKnown RBP21.82■■□□□ 1.08
SSBP4-210ENST00000601444 JADE1Q6IE81 842 aa21.82■■□□□ 1.08
SSBP4-210ENST00000601444 FUT10Q6P4F1 479 aa21.82■■□□□ 1.08
SSBP4-210ENST00000601444 MAPK8IP1Q9UQF2 711 aa21.82■■□□□ 1.08
SSBP4-210ENST00000601444 TULP1O00294 542 aaPredicted RBP21.81■■□□□ 1.08
SSBP4-210ENST00000601444 C2CD2LO14523 706 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 B3GAT3O94766 335 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 NFICP08651 508 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 UBE2HP62256 183 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 KCNB1Q14721 858 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 DCLRE1AQ6PJP8 1040 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 HERC2P3Q9BVR0 1158 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 HSPBP1Q9NZL4 362 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 MYO7AQ13402 2215 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 UNC80Q8N2C7 3258 aa21.81■■□□□ 1.08
SSBP4-210ENST00000601444 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-210ENST00000601444 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-210ENST00000601444 PODXLO00592 558 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 EXTL3O43909 919 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 LILRB3O75022 631 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 DLX2Q07687 328 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-210ENST00000601444 COL19A1Q14993 1142 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 PTPN14Q15678 1187 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 DUSP6Q16828 381 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 CLEC17AQ6ZS10 378 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 EP400NLQ6ZTU2 488 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 SMYD4Q8IYR2 804 aaPredicted RBP21.8■■□□□ 1.08
SSBP4-210ENST00000601444 GPD1LQ8N335 351 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 HLA-CQ95604 372 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 CCDC47Q96A33 483 aaKnown RBP21.8■■□□□ 1.08
SSBP4-210ENST00000601444 CCDC34Q96HJ3 373 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 UROC1Q96N76 676 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 CHST7Q9NS84 486 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 CLDND1Q9NY35 253 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 PCDHA5Q9Y5H7 936 aa21.8■■□□□ 1.08
SSBP4-210ENST00000601444 CITO14578 2027 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 I3L4J1 428 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 KINO60870 393 aaKnown RBP21.79■■□□□ 1.08
SSBP4-210ENST00000601444 LDHAP00338 332 aaKnown RBP21.79■■□□□ 1.08
SSBP4-210ENST00000601444 LTBRP36941 435 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 BRCC3P46736 316 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 ADAM15Q13444 863 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 CTC1Q2NKJ3 1217 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 KIAA0319Q5VV43 1072 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 CBWD2Q8IUF1 395 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 CD302Q8IX05 232 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 VN1R2Q8NFZ6 395 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 PABPC5Q96DU9 382 aaKnown RBP21.79■■□□□ 1.08
SSBP4-210ENST00000601444 FAM84AQ96KN4 292 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 KCTD10Q9H3F6 313 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 ASB7Q9H672 318 aa21.79■■□□□ 1.08
SSBP4-210ENST00000601444 UBE2ZQ9H832 354 aaPredicted RBP21.79■■□□□ 1.08
SSBP4-210ENST00000601444 RBAKQ9NYW8 714 aaPredicted RBP21.79■■□□□ 1.08
SSBP4-210ENST00000601444 UBQLN1Q9UMX0 589 aaKnown RBP21.79■■□□□ 1.08
SSBP4-210ENST00000601444 TMEM189-UBE2V1I3L0A0 370 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 GLP2RO95838 553 aa21.78■■□□□ 1.08
SSBP4-210ENST00000601444 RPL9P32969 192 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms