RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 EURLQ9NYK6 297 aa13.21□□□□□ -0.29
PDE4A-207ENST00000590407 SLC16A4O15374 487 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 ATP2C2O75185 946 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CDH16O75309 829 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 DLATP10515 647 aaKnown RBP13.2□□□□□ -0.3
PDE4A-207ENST00000590407 NQO1P15559 274 aaKnown RBP13.2□□□□□ -0.3
PDE4A-207ENST00000590407 GARTP22102 1010 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 SLC18A1P54219 525 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 PEX3P56589 373 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 RTP1P59025 263 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 PPARDQ03181 441 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 NR1H3Q13133 447 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 RNF43Q68DV7 783 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 SMYD5Q6GMV2 418 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 TRIM72Q6ZMU5 477 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 SPATA21Q7Z572 469 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CCDC25Q86WR0 208 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 FLAD1Q8NFF5 587 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 DYDC1Q8WWB3 177 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 C1orf54Q8WWF1 131 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 VCPIP1Q96JH7 1222 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 IFT74Q96LB3 600 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 SCLT1Q96NL6 688 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 RXFP1Q9HBX9 757 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 NINJ2Q9NZG7 142 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 COL20A1Q9P218 1284 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 ANAPC7Q9UJX3 599 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 TCP11X1B4DZS4 312 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 UBOX5O94941 541 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 ACSL3O95573 720 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CNGA1P29973 690 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CHKAP35790 457 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CAP2P40123 477 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 IFNAR2P48551 515 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 ITGA8P53708 1063 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 COPS2P61201 443 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CLDN10P78369 228 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 SPP2Q13103 211 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 C15orf39Q6ZRI6 1047 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 ARHGEF18Q6ZSZ5 1173 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 MAEAQ7L5Y9 396 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 TDRPQ86YL5 185 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CCDC89Q8N998 374 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 SUPT20HQ8NEM7 779 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 UHMK1Q8TAS1 419 aaKnown RBP13.2□□□□□ -0.3
PDE4A-207ENST00000590407 TAS1R2Q8TE23 839 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CCDC77Q9BR77 488 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 UBN1Q9NPG3 1134 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CHST7Q9NS84 486 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 FGFR1OP2Q9NVK5 253 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CHORDC1Q9UHD1 332 aaPredicted RBP13.2□□□□□ -0.3
PDE4A-207ENST00000590407 ANAPC5Q9UJX4 755 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 TRPC5Q9UL62 973 aaPredicted RBP13.2□□□□□ -0.3
PDE4A-207ENST00000590407 CCPG1Q9ULG6 757 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 AGAP1Q9UPQ3 857 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 PCDHB2Q9Y5E7 798 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 NFASCO94856 1347 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 MROH7Q68CQ1 1323 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 MYPNQ86TC9 1320 aa13.2□□□□□ -0.3
PDE4A-207ENST00000590407 WDR64B1ANS9 1081 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 DDX39AO00148 427 aaKnown RBP13.19□□□□□ -0.3
PDE4A-207ENST00000590407 THAP12O43422 761 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 KIF1CO43896 1103 aaKnown RBP13.19□□□□□ -0.3
PDE4A-207ENST00000590407 PROSCO94903 275 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 CYP1A1P04798 512 aaPredicted RBP13.19□□□□□ -0.3
PDE4A-207ENST00000590407 SCP2P22307 547 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 NPTX2P47972 431 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
PDE4A-207ENST00000590407 KRT76Q01546 638 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 MAP3K10Q02779 954 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 STRN3Q13033 797 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 DMP1Q13316 513 aaPredicted RBP13.19□□□□□ -0.3
PDE4A-207ENST00000590407 MTMR1Q13613 665 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 CHADLQ6NUI6 762 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 XRRA1Q6P2D8 792 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 RGS9BPQ6ZS82 235 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 SV2AQ7L0J3 742 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 CEP57Q86XR8 500 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 KATNAL2Q8IYT4 538 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 IL31RAQ8NI17 732 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
PDE4A-207ENST00000590407 SENP7Q9BQF6 1050 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 PPCSQ9HAB8 311 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 ACP6Q9NPH0 428 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 ARHGEF3Q9NR81 526 aa13.19□□□□□ -0.3
PDE4A-207ENST00000590407 CNTNAP1P78357 1384 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 GOLGA8IPA6NC78 632 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 GOLGA8JA6NMD2 632 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 NDC80O14777 642 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 MAGEB2O15479 319 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 BRAFP15056 766 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 SLC8A3P57103 927 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 RASA2Q15283 850 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 MTFR1Q15390 333 aa13.18□□□□□ -0.3
PDE4A-207ENST00000590407 CCDC38Q502W7 563 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms