RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 HAPLN2Q9GZV7 340 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 TMEM117Q9H0C3 514 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 NKX2-4Q9H2Z4 354 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 DEF6Q9H4E7 631 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 ZNF576Q9H609 170 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 KIAA1586Q9HCI6 787 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 TMEM8AQ9HCN3 771 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 ZNF215Q9UL58 517 aaPredicted RBP10.18□□□□□ -0.78
VPS25-205ENST00000590339 RALGAPA2Q2PPJ7 1873 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 LAMA3Q16787 3333 aa10.18□□□□□ -0.78
VPS25-205ENST00000590339 LTBP2Q14767 1821 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 C17orf102A2RUQ5 167 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 ABLIM1O14639 778 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 TREHO43280 583 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 TADA3O75528 432 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 SMIM10L2AP0DMW4 78 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 SMIM10L2BP0DMW5 78 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 CKBP12277 381 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 SELPP16109 830 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 ATP2A2P16615 1042 aaKnown RBP10.17□□□□□ -0.78
VPS25-205ENST00000590339 SOX5P35711 763 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 THPOP40225 353 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 STAT1P42224 750 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 GCLMP48507 274 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 GPC3P51654 580 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 EFNA5P52803 228 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 PTK2Q05397 1052 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 GFPT1Q06210 699 aaPredicted RBP10.17□□□□□ -0.78
VPS25-205ENST00000590339 NCBP1Q09161 790 aaKnown RBP10.17□□□□□ -0.78
VPS25-205ENST00000590339 PTK7Q13308 1070 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 TUBB2AQ13885 445 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 MXD4Q14582 209 aaPredicted RBP10.17□□□□□ -0.78
VPS25-205ENST00000590339 PSMD6Q15008 389 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 ZNF618Q5T7W0 954 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 PHLDB3Q6NSJ2 640 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 C15orf39Q6ZRI6 1047 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 LRRC8DQ7L1W4 858 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 ZNF571Q7Z3V5 609 aaPredicted RBP10.17□□□□□ -0.78
VPS25-205ENST00000590339 IFNLR1Q8IU57 520 aaPredicted RBP10.17□□□□□ -0.78
VPS25-205ENST00000590339 GPIHBP1Q8IV16 184 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 ARHGEF19Q8IW93 802 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 TXLNBQ8N3L3 684 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 CAGE1Q8TC20 777 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 PRPF31Q8WWY3 499 aaKnown RBP10.17□□□□□ -0.78
VPS25-205ENST00000590339 PSPC1Q8WXF1 523 aaKnown RBP10.17□□□□□ -0.78
VPS25-205ENST00000590339 ANKRD7Q92527 254 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 BICD1Q96G01 975 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 TUBB2BQ9BVA1 445 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 C2orf40Q9H1Z8 148 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 RNPEPQ9H4A4 650 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 SETD4Q9NVD3 440 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 ERAP1Q9NZ08 941 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 DNAJC12Q9UKB3 198 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 TFR2Q9UP52 801 aa10.17□□□□□ -0.78
VPS25-205ENST00000590339 EVPLQ92817 2033 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 A0A087X0T9 212 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 A0A0B4J269 797 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 ANO9A1A5B4 782 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 CTAGE9A4FU28 777 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 BTNL10A8MVZ5 291 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 K7ERI5 159 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 FAM189A1O60320 539 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 URI1O94763 535 aaPredicted RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 PFKMP08237 780 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 FAM228BP0C875 321 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 FOSL2P15408 326 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 RFC2P35250 354 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 MAGEA1P43355 309 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 NLRP11P59045 1033 aaKnown RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 LAMTOR4Q0VGL1 99 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 CETN1Q12798 172 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 KIF5AQ12840 1032 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 DRAP1Q14919 205 aaPredicted RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 GPNMBQ14956 572 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 C10orf76Q5T2E6 689 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 KRT39Q6A163 491 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 SLFN12LQ6IEE8 588 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 CRELD2Q6UXH1 353 aaPredicted RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 USP37Q86T82 979 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 ZNF710Q8N1W2 664 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 LRRC71Q8N4P6 559 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 LRRN4CLQ8ND94 238 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 TRAPPC12Q8WVT3 735 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 PPM1EQ8WY54 764 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 SECISBP2LQ93073 1101 aaKnown RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 TARS2Q9BW92 718 aaKnown RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 NFKBIZQ9BYH8 718 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 PRDM12Q9H4Q4 367 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 SLC28A3Q9HAS3 691 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 LUC7LQ9NQ29 371 aaKnown RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 TOPORSQ9NS56 1045 aaPredicted RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 CDC23Q9UJX2 597 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 AGO2Q9UKV8 859 aaKnown RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 GUCA1BQ9UMX6 200 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 TRPC6Q9Y210 931 aa10.16□□□□□ -0.78
VPS25-205ENST00000590339 YBX2Q9Y2T7 364 aaKnown RBP10.16□□□□□ -0.78
VPS25-205ENST00000590339 CNTNAP2Q9UHC6 1331 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 ZNF233A6NK53 670 aa10.15□□□□□ -0.78
VPS25-205ENST00000590339 NBNO60934 754 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 351 ms