RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 EFNA5P52803 228 aa20.51■□□□□ 0.87
PRKCSH-209ENST00000589838 GNGT1P63211 74 aa20.51■□□□□ 0.87
PRKCSH-209ENST00000589838 IRX3P78415 501 aaPredicted RBP20.51■□□□□ 0.87
PRKCSH-209ENST00000589838 KCNV1Q6PIU1 500 aa20.51■□□□□ 0.87
PRKCSH-209ENST00000589838 CRELD2Q6UXH1 353 aaPredicted RBP20.51■□□□□ 0.87
PRKCSH-209ENST00000589838 GADL1Q6ZQY3 521 aa20.51■□□□□ 0.87
PRKCSH-209ENST00000589838 SLC13A5Q86YT5 568 aaPredicted RBP20.51■□□□□ 0.87
PRKCSH-209ENST00000589838 MCOLN2Q8IZK6 566 aa20.51■□□□□ 0.87
PRKCSH-209ENST00000589838 ZNF526Q8TF50 670 aaPredicted RBP20.51■□□□□ 0.87
PRKCSH-209ENST00000589838 H0YGN5 161 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 ADCY3O60266 1144 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 MAFO75444 373 aaPredicted RBP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 SLC25A27O95847 323 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 MAPK4P31152 587 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 COPB2P35606 906 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 IREB2P48200 963 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 MARCKSL1P49006 195 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 DHX9Q08211 1270 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 FSTL1Q12841 308 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 UAP1Q16222 522 aaPredicted RBP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 CYP1B1Q16678 543 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 KCTD16Q68DU8 428 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 ZPBP2Q6X784 338 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 PRELID2Q8N945 189 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 MAIP1Q8WWC4 291 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 TARS2Q9BW92 718 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 AZI2Q9H6S1 392 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 NFS1Q9Y697 457 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 SOWAHBA6NEL2 793 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 EIF3HO15372 352 aaKnown RBP eCLIP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 GAS2O43903 313 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 PPFIA2O75334 1257 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 PYGMP11217 842 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 NR1D1P20393 614 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 PTGIRP43119 386 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 NSFP46459 744 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 EIF3BP55884 814 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 CUL2Q13617 745 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 LIN9Q5TKA1 542 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 IER5Q5VY09 327 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 METTL7BQ6UX53 244 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 SULF1Q8IWU6 871 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 ATP8B4Q8TF62 1192 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 TCP11Q8WWU5 503 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 PCYT2Q99447 389 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 FAM129AQ9BZQ8 928 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 TRIM31Q9BZY9 425 aa20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 ADARB2Q9NS39 739 aaKnown RBP20.5■□□□□ 0.87
PRKCSH-209ENST00000589838 GOLGB1Q14789 3259 aaKnown RBP20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 AGBL2Q5U5Z8 902 aa20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 LMBRD2Q68DH5 695 aaPredicted RBP20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 GLG1Q92896 1179 aa20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 ZBTB45Q96K62 511 aaPredicted RBP20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 ANKFY1Q9P2R3 1169 aa20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 CHORDC1Q9UHD1 332 aaPredicted RBP20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 ANAPC7Q9UJX3 599 aa20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 PCDHB4Q9Y5E5 795 aa20.49■□□□□ 0.87
PRKCSH-209ENST00000589838 A0A0G2JLL6 359 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 VNN1O95497 513 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 CYP1A1P04798 512 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 TCF7P36402 384 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 FNTAP49354 379 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 CENPCQ03188 943 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 GRM1Q13255 1194 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 DNAJC21Q5F1R6 531 aaKnown RBP20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 SMYD5Q6GMV2 418 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 AADACL2Q6P093 401 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 CCDC137Q6PK04 289 aaKnown RBP20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 PRRT2Q7Z6L0 340 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 SH2D3CQ8N5H7 860 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 C12orf50Q8NA57 414 aaPredicted RBP20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 NLGN2Q8NFZ4 835 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 VCPIP1Q96JH7 1222 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 BTBD6Q96KE9 485 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 IMPG2Q9BZV3 1241 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 HAPLN2Q9GZV7 340 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 ADGRA2Q96PE1 1338 aa20.48■□□□□ 0.87
PRKCSH-209ENST00000589838 CXCL11O14625 94 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 CLDN3O15551 220 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 FLT3P36888 993 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 COILP38432 576 aaPredicted RBP20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 CAPSQ13938 189 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 SURF1Q15526 300 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 BBXQ8WY36 941 aaPredicted RBP20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 C18orf8Q96DM3 657 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 MRPL4Q9BYD3 311 aaKnown RBP20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 ZDHHC18Q9NUE0 388 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 MTRF1LQ9UGC7 380 aaKnown RBP20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 MYO1FO00160 1098 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 IRF6O14896 467 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 CLTAP09496 248 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 ACO1P21399 889 aaKnown RBP20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 ZNF844Q08AG5 666 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 MXD4Q14582 209 aaPredicted RBP20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 TXLNGYQ9BZA5 131 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 MRPL47Q9HD33 250 aaKnown RBP20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 CNTN6Q9UQ52 1028 aa20.47■□□□□ 0.87
PRKCSH-209ENST00000589838 FSCN2O14926 492 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms