RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CYP3A5P20815 502 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 AFF1P51825 1210 aaKnown RBP21.24■□□□□ 0.99
CIRBP-220ENST00000588917 TUSC3Q13454 348 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 CEP135Q66GS9 1140 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 PPP2R2DQ66LE6 453 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 MFSD14AQ96MC6 490 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 CEP63Q96MT8 703 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 UROC1Q96N76 676 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 PPP1R10Q96QC0 940 aaKnown RBP21.24■□□□□ 0.99
CIRBP-220ENST00000588917 FNBP1Q96RU3 617 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 MKNK1Q9BUB5 465 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 PLVAPQ9BX97 442 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 CWH43Q9H720 699 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 UBQLN1Q9UMX0 589 aaKnown RBP21.24■□□□□ 0.99
CIRBP-220ENST00000588917 CTNND2Q9UQB3 1225 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 C2CD2Q9Y426 696 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 COL4A6Q14031 1691 aa21.24■□□□□ 0.99
CIRBP-220ENST00000588917 CHD9Q3L8U1 2897 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 CCDC192P0DO97 292 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 RPL9P32969 192 aaKnown RBP21.23■□□□□ 0.99
CIRBP-220ENST00000588917 BMPR1AP36894 532 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 ERVK-21P61565 698 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 TAP1Q03518 808 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 ENPEPQ07075 957 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 DPCR1Q3MIW9 517 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 FILIP1Q7Z7B0 1213 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 CBWD2Q8IUF1 395 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 KIF12Q96FN5 646 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 DDX27Q96GQ7 796 aaKnown RBP21.23■□□□□ 0.99
CIRBP-220ENST00000588917 ZNF558Q96NG5 402 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 NAT10Q9H0A0 1025 aaKnown RBP21.23■□□□□ 0.99
CIRBP-220ENST00000588917 NRDE2Q9H7Z3 1164 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 FAN1Q9Y2M0 1017 aa21.23■□□□□ 0.99
CIRBP-220ENST00000588917 DDHD2O94830 711 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 GNA14O95837 355 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 EPB41P11171 864 aaKnown RBP21.22■□□□□ 0.99
CIRBP-220ENST00000588917 PPM1AP35813 382 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 CYP24A1Q07973 514 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 DSC1Q08554 894 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 PSMD6Q15008 389 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 ZBTB6Q15916 424 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 TJAP1Q5JTD0 557 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 TTI2Q6NXR4 508 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 KCNT2Q6UVM3 1135 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 INTS8Q75QN2 995 aaKnown RBP21.22■□□□□ 0.99
CIRBP-220ENST00000588917 ZNF280BQ86YH2 543 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 ZC3H3Q8IXZ2 948 aaKnown RBP21.22■□□□□ 0.99
CIRBP-220ENST00000588917 COLGALT2Q8IYK4 626 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 CSGALNACT2Q8N6G5 542 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 ZSWIM2Q8NEG5 633 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 BEST2Q8NFU1 509 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 ZMAT2Q96NC0 199 aaKnown RBP21.22■□□□□ 0.99
CIRBP-220ENST00000588917 COLEC11Q9BWP8 271 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 STK39Q9UEW8 545 aa21.22■□□□□ 0.99
CIRBP-220ENST00000588917 TRIM49BA6NDI0 452 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 TULP1O00294 542 aaPredicted RBP21.21■□□□□ 0.99
CIRBP-220ENST00000588917 SLC16A3O15427 465 aaKnown RBP21.21■□□□□ 0.99
CIRBP-220ENST00000588917 ZC3H11AO75152 810 aaKnown RBP eCLIP21.21■□□□□ 0.993e-7■■□□□ 12.2
CIRBP-220ENST00000588917 GALTP07902 379 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 KRT13P13646 458 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 AP3M2P53677 418 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 PMS1P54277 932 aaKnown RBP21.21■□□□□ 0.99
CIRBP-220ENST00000588917 BCAR1P56945 870 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 TYRO3Q06418 890 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 TMEM132DQ14C87 1099 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 TPD52L1Q16890 204 aaPredicted RBP21.21■□□□□ 0.99
CIRBP-220ENST00000588917 JADE1Q6IE81 842 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 FAM186BQ8IYM0 893 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 PPM1EQ8WY54 764 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 METTL14Q9HCE5 456 aaKnown RBP21.21■□□□□ 0.99
CIRBP-220ENST00000588917 PTPRSQ13332 1948 aa21.21■□□□□ 0.99
CIRBP-220ENST00000588917 C5orf67F2Z3F1 127 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 MEFVO15553 781 aaPredicted RBP21.2■□□□□ 0.98
CIRBP-220ENST00000588917 AKAP3O75969 853 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 PAX3P23760 479 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 OR1G1P47890 313 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 STX17P56962 302 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 KRT17Q04695 432 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 NAB2Q15742 525 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 DUOXA2Q1HG44 320 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 GLRA4Q5JXX5 417 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 SPATA1Q5VX52 437 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 DCLRE1AQ6PJP8 1040 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 WDR49Q8IV35 697 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 COLGALT1Q8NBJ5 622 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 TMC2Q8TDI7 906 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 DUSP9Q99956 384 aaKnown RBP21.2■□□□□ 0.98
CIRBP-220ENST00000588917 SRRTQ9BXP5 876 aaKnown RBP21.2■□□□□ 0.98
CIRBP-220ENST00000588917 PDE11AQ9HCR9 933 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 SPG21Q9NZD8 308 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 PLAGL2Q9UPG8 496 aa21.2■□□□□ 0.98
CIRBP-220ENST00000588917 NRP1O14786 923 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 IKBKBO14920 756 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 TNNI1P19237 187 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 IGFBP4P22692 258 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 CTNNB1P35222 781 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 CASP4P49662 377 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 ADGRE1Q14246 886 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 EPC2Q52LR7 807 aa21.19■□□□□ 0.98
CIRBP-220ENST00000588917 PARD3BQ8TEW8 1205 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms