RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CLLU1OSQ5K130 101 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 CDKAL1Q5VV42 579 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 CEP135Q66GS9 1140 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 CBWD2Q8IUF1 395 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 WDR49Q8IV35 697 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 TMEM192Q8IY95 271 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 FAM186BQ8IYM0 893 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 CMTR2Q8IYT2 770 aaKnown RBP11.29□□□□□ -0.6
CCDC47-203ENST00000580986 GSTCDQ8NEC7 633 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 URGCPQ8TCY9 931 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 PARD3BQ8TEW8 1205 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 SAAL1Q96ER3 474 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 SRRTQ9BXP5 876 aaKnown RBP11.29□□□□□ -0.6
CCDC47-203ENST00000580986 SLC38A7Q9NVC3 462 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 CXXC1Q9P0U4 656 aaPredicted RBP11.29□□□□□ -0.6
CCDC47-203ENST00000580986 NFE2L3Q9Y4A8 694 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 HES2Q9Y543 173 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 RANBP2P49792 3224 aaKnown RBP11.29□□□□□ -0.6
CCDC47-203ENST00000580986 CEP290O15078 2479 aa11.29□□□□□ -0.6
CCDC47-203ENST00000580986 TDRD15B5MCY1 1934 aaKnown RBP11.29□□□□□ -0.6
CCDC47-203ENST00000580986 ZBBXA8MT70 800 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 PMM2O15305 246 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 MEFVO15553 781 aaPredicted RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 HARSP12081 509 aaKnown RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 KRT13P13646 458 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 ATP2A2P16615 1042 aaKnown RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 ZNF18P17022 549 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 PAX3P23760 479 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 AKAP5P24588 427 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 EEF1GP26641 437 aaKnown RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 GTF2H1P32780 548 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 MLH1P40692 756 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 CASP4P49662 377 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 SHHQ15465 462 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 TPD52L1Q16890 204 aaPredicted RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 NOMO2Q5JPE7 1267 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 ZBTB41Q5SVQ8 909 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 IRF2BP1Q8IU81 584 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 HERC6Q8IVU3 1022 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 TRIM59Q8IWR1 403 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 DHX40Q8IX18 779 aaKnown RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 TDHQ8IZJ6 230 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 ABI1Q8IZP0 508 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 LRRC43Q8N309 656 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 RNPC3Q96LT9 517 aaKnown RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 CASD1Q96PB1 797 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 PPP1R10Q96QC0 940 aaKnown RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 FNBP1Q96RU3 617 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 RPS6KC1Q96S38 1066 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 PARP2Q9UGN5 583 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 ARMCX3Q9UH62 379 aaPredicted RBP11.28□□□□□ -0.6
CCDC47-203ENST00000580986 INSL6Q9Y581 213 aa11.28□□□□□ -0.6
CCDC47-203ENST00000580986 SMIM28A0A1B0GU29 152 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 GOLGA8IPA6NC78 632 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 LRRC10BA6NIK2 292 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 GOLGA8JA6NMD2 632 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 MEIS3P2A8K0S8 358 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 BECN2A8MW95 431 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 LACTBL1A8MY62 500 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 PTGESO14684 152 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 STX10O60499 249 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 THP07101 528 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 VAMP7P51809 220 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 OSTNP61366 133 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 DSC1Q08554 894 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 NAB2Q15742 525 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 C9orf50Q5SZB4 431 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 AOPEPQ8N6M6 819 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 ZSWIM2Q8NEG5 633 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 LPPQ93052 612 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 CNOT6LQ96LI5 555 aaKnown RBP11.27□□□□□ -0.61
CCDC47-203ENST00000580986 UROC1Q96N76 676 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 GAD1Q99259 594 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 RAD9AQ99638 391 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 CGRRF1Q99675 332 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 HSD3B7Q9H2F3 369 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 CBX8Q9HC52 389 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 UBQLN1Q9UMX0 589 aaKnown RBP11.27□□□□□ -0.61
CCDC47-203ENST00000580986 TRIP11Q15643 1979 aa11.27□□□□□ -0.61
CCDC47-203ENST00000580986 P4HA2O15460 535 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 FGFR1P11362 822 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 LRPAP1P30533 357 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 PBX2P40425 430 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 TPM4P67936 248 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 TUSC3Q13454 348 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 TMEM132DQ14C87 1099 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 DUOXA2Q1HG44 320 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 CCDC40Q4G0X9 1142 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 SEZ6Q53EL9 994 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 TCP11X2Q5H9J9 407 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 PRPF38BQ5VTL8 546 aaKnown RBP11.26□□□□□ -0.61
CCDC47-203ENST00000580986 SMYD5Q6GMV2 418 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 C15orf39Q6ZRI6 1047 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 RDH13Q8NBN7 331 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 RNF169Q8NCN4 708 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 HELQQ8TDG4 1101 aa11.26□□□□□ -0.61
CCDC47-203ENST00000580986 CACTINQ8WUQ7 758 aaKnown RBP11.26□□□□□ -0.61
CCDC47-203ENST00000580986 CLP1Q92989 425 aaKnown RBP11.26□□□□□ -0.61
CCDC47-203ENST00000580986 SLC35C1Q96A29 364 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms