RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 KCNE1P15382 129 aa20.36■□□□□ 0.85
PPP4R1-215ENST00000580182 CNNM4Q6P4Q7 775 aa20.36■□□□□ 0.85
PPP4R1-215ENST00000580182 CD300LGQ6UXG3 332 aa20.36■□□□□ 0.85
PPP4R1-215ENST00000580182 ACCSQ96QU6 501 aa20.36■□□□□ 0.85
PPP4R1-215ENST00000580182 PCDHB13Q9Y5F0 798 aa20.36■□□□□ 0.85
PPP4R1-215ENST00000580182 HCFC2Q9Y5Z7 792 aa20.36■□□□□ 0.85
PPP4R1-215ENST00000580182 STYXL1Q9Y6J8 313 aa20.36■□□□□ 0.85
PPP4R1-215ENST00000580182 GRXCR2A6NFK2 248 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 URODP06132 367 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 CNPP09543 421 aaKnown RBP20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 SLFN14P0C7P3 912 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 ADSSP30520 456 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 GLUD2P49448 558 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 NDUFA8P51970 172 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 ENOX2Q16206 610 aaKnown RBP20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 KIAA0319Q5VV43 1072 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 CEP57L1Q8IYX8 460 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 C3orf58Q8NDZ4 430 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 PAGE5Q96GU1 130 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 KLHL5Q96PQ7 755 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 GOLPH3LQ9H4A5 285 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 MRPL17Q9NRX2 175 aaKnown RBP20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 CHST7Q9NS84 486 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 STK39Q9UEW8 545 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 CD207Q9UJ71 328 aa20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 CPSF3Q9UKF6 684 aaKnown RBP20.35■□□□□ 0.85
PPP4R1-215ENST00000580182 TTC26A0AVF1 554 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 LACTBL1A8MY62 500 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 EPCAMP16422 314 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 ACOT2P49753 483 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 DSG1Q02413 1049 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 UPP1Q16831 310 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 TMEM184AQ6ZMB5 413 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 FSIP1Q8NA03 581 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 TMEM87AQ8NBN3 555 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 ZSWIM2Q8NEG5 633 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 PYM1Q9BRP8 204 aaKnown RBP20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 APOL5Q9BWW9 433 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 RPF1Q9H9Y2 349 aaKnown RBP20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 TUBGCP4Q9UGJ1 667 aa20.34■□□□□ 0.85
PPP4R1-215ENST00000580182 FAM237AA0A1B0GTK4 181 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 A0A1W2PQ27 194 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 A0A1W2PQ64 194 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 A0A1W2PQD8 194 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 MBTPS2O43462 519 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 B3GAT3O94766 335 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 USP41Q3LFD5 358 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 RTP2Q5QGT7 225 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 SLFN12LQ6IEE8 588 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 KIAA1841Q6NSI8 718 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 ANKRD54Q6NXT1 300 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 DCLRE1AQ6PJP8 1040 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 UNC13DQ70J99 1090 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 SLC22A17Q8WUG5 538 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 POMGNT1Q8WZA1 660 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 FAM212AQ96EL1 285 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 UROC1Q96N76 676 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 UHRF1Q96T88 793 aaPredicted RBP20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 PLEKHA5Q9HAU0 1116 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 SLC38A7Q9NVC3 462 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 AGO2Q9UKV8 859 aaKnown RBP20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 EXOC7Q9UPT5 735 aa20.33■□□□□ 0.85
PPP4R1-215ENST00000580182 PDCD11Q14690 1871 aaKnown RBP20.33■□□□□ 0.84
PPP4R1-215ENST00000580182 SF3B1O75533 1304 aaKnown RBP eCLIP20.32■□□□□ 0.844e-6■■■■■ 34.5
PPP4R1-215ENST00000580182 I3L4J1 428 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 PODXLO00592 558 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 TEX28O15482 410 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 KLRC2P26717 231 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 HOXD13P35453 343 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 SYKP43405 635 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 BRCC3P46736 316 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 PPP2R3AQ06190 1150 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 EHHADHQ08426 723 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 ALCAMQ13740 583 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 KYAT1Q16773 422 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 FAM26FQ5R3K3 315 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 FAM171A1Q5VUB5 890 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 SYCE2Q6PIF2 218 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 PRSS55Q6UWB4 352 aaPredicted RBP20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 CRELD2Q6UXH1 353 aaPredicted RBP20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 CEP57Q86XR8 500 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 SYCP3Q8IZU3 236 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 RIN2Q8WYP3 895 aaPredicted RBP20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 KIF12Q96FN5 646 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 EMILIN2Q9BXX0 1053 aa20.32■□□□□ 0.84
PPP4R1-215ENST00000580182 FSD2A1L4K1 749 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 TMEM189-UBE2V1I3L0A0 370 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 KLRC4O43908 158 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 ADRB2P07550 413 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 RPL17P18621 184 aaKnown RBP20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 GUCY2FP51841 1108 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 SMAD4Q13485 552 aaKnown RBP20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 ZBTB6Q15916 424 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 PUS10Q3MIT2 529 aaKnown RBP20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 KANK3Q6NY19 840 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 EPM2AIP1Q7L775 607 aaPredicted RBP20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 SMRP1Q8NCR6 262 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 FEZF2Q8TBJ5 459 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 CASP10Q92851 521 aa20.31■□□□□ 0.84
PPP4R1-215ENST00000580182 SAAL1Q96ER3 474 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms