RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TBCAO75347 108 aaKnown RBP17.16■□□□□ 0.34
USB1-208ENST00000563207 PRKCBP05771 671 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 PLS3P13797 630 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 EFNA5P52803 228 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 UBE2HP62256 183 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 DSG1Q02413 1049 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 MAPK7Q13164 816 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 PRPF4BQ13523 1007 aaKnown RBP17.16■□□□□ 0.34
USB1-208ENST00000563207 NAB2Q15742 525 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 FAM187BQ17R55 369 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 FUT10Q6P4F1 479 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 PPFIBP1Q86W92 1011 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 KCNN1Q92952 543 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 C7orf25Q9BPX7 421 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 COLEC11Q9BWP8 271 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 RXFP1Q9HBX9 757 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 SEL1LQ9UBV2 794 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 GDAQ9Y2T3 454 aa17.16■□□□□ 0.34
USB1-208ENST00000563207 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 GOLGA6L22H0YM25 854 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 ACTN4O43707 911 aaKnown RBP17.15■□□□□ 0.34
USB1-208ENST00000563207 RECQL4O94761 1208 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 FAM13AO94988 1023 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 ZNF202O95125 648 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 GAP43P17677 238 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 NPTX2P47972 431 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 FAM160A1Q05DH4 1040 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 RAD51AP2Q09MP3 1159 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 GRIK3Q13003 919 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 RTP2Q5QGT7 225 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 ST13P5Q8NFI4 369 aaPredicted RBP17.15■□□□□ 0.34
USB1-208ENST00000563207 DEPTORQ8TB45 409 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 RIN2Q8WYP3 895 aaPredicted RBP17.15■□□□□ 0.34
USB1-208ENST00000563207 DNAJC19Q96DA6 116 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 PRIMPOLQ96LW4 560 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 TRIM9Q9C026 710 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 SERTAD1Q9UHV2 236 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 ADAM28Q9UKQ2 775 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 SORCS3Q9UPU3 1222 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 VWA8A3KMH1 1905 aa17.15■□□□□ 0.34
USB1-208ENST00000563207 MTCL1Q9Y4B5 1905 aaKnown RBP17.15■□□□□ 0.34
USB1-208ENST00000563207 DOCK6Q96HP0 2047 aa17.14■□□□□ 0.34
USB1-208ENST00000563207 CCDC195A0A1B0GUA6 201 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 CARNS1A5YM72 827 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 ACKR2O00590 384 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 TGM5O43548 720 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 KIF4AO95239 1232 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 MAPTP10636 758 aaKnown RBP17.14■□□□□ 0.33
USB1-208ENST00000563207 PEX3P56589 373 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 TCF15Q12870 199 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
USB1-208ENST00000563207 MAPK6Q16659 721 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 TMEM132AQ24JP5 1023 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 GLRA4Q5JXX5 417 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 HACE1Q8IYU2 909 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 ZDHHC14Q8IZN3 488 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 FMR1NBQ8N0W7 255 aaPredicted RBP17.14■□□□□ 0.33
USB1-208ENST00000563207 CEP120Q8N960 986 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 TDRD5Q8NAT2 981 aaKnown RBP17.14■□□□□ 0.33
USB1-208ENST00000563207 ZNF707Q96C28 371 aaPredicted RBP17.14■□□□□ 0.33
USB1-208ENST00000563207 TIGD1Q96MW7 591 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 GOLPH3LQ9H4A5 285 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 TMEM134Q9H6X4 195 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 KMT5AQ9NQR1 393 aa17.14■□□□□ 0.33
USB1-208ENST00000563207 NPHP3-ACAD11A0A0J9YXS1 232 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 FRMD3A2A2Y4 597 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 CCDC169A6NNP5 214 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 SFI1A8K8P3 1242 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 N4BP3O15049 544 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 ADAM12O43184 909 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 ADH1AP07327 375 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 AVPR2P30518 371 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 MRE11P49959 708 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 TUSC3Q13454 348 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 MTMR3Q13615 1198 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 KRBA2Q6ZNG9 492 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 TAS1R3Q7RTX0 852 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 SUGP1Q8IWZ8 645 aaKnown RBP17.13■□□□□ 0.33
USB1-208ENST00000563207 CCDC65Q8IXS2 484 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 ELOA2Q8IYF1 753 aaPredicted RBP17.13■□□□□ 0.33
USB1-208ENST00000563207 TMEM130Q8N3G9 435 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 MYCT1Q8N699 235 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 ENGASEQ8NFI3 743 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 RSAD2Q8WXG1 361 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 PAGE5Q96GU1 130 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 ARHGAP28Q9P2N2 729 aa17.13■□□□□ 0.33
USB1-208ENST00000563207 PVALEFA0A1B0GWK0 134 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 K7ERI5 159 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 TRAK2O60296 914 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 PRPF40AO75400 957 aaKnown RBP17.12■□□□□ 0.33
USB1-208ENST00000563207 TADA2AO75478 443 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 GLUD1P00367 558 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 NCKAP1LP55160 1127 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 SNW1Q13573 536 aaKnown RBP17.12■□□□□ 0.33
USB1-208ENST00000563207 USP41Q3LFD5 358 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 LILRA6Q6PI73 481 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 CD300LGQ6UXG3 332 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 ST6GALNAC4Q9H4F1 302 aa17.12■□□□□ 0.33
USB1-208ENST00000563207 GOLGA2P5Q9HBQ8 144 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 334.2 ms