RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ZNF180Q9UJW8 692 aa6.18□□□□□ -1.42
USP8-218ENST00000561330 AHRRA9YTQ3 701 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 DIRC3C9JPN6 131 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 PPM1GO15355 546 aaPredicted RBP6.17□□□□□ -1.42
USP8-218ENST00000561330 PEX11BO96011 259 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 POU2F2P09086 479 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 ALAS1P13196 640 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 ZSCAN20P17040 1043 aaPredicted RBP6.17□□□□□ -1.42
USP8-218ENST00000561330 RNASE9P60153 205 aaKnown RBP6.17□□□□□ -1.42
USP8-218ENST00000561330 CRIP3Q6Q6R5 217 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 MED25Q71SY5 747 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 UBE3BQ7Z3V4 1068 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 GDF7Q7Z4P5 450 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 NSUN6Q8TEA1 469 aaKnown RBP6.17□□□□□ -1.42
USP8-218ENST00000561330 SLC25A43Q8WUT9 341 aaPredicted RBP6.17□□□□□ -1.42
USP8-218ENST00000561330 MRGPRX4Q96LA9 322 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 REXO4Q9GZR2 422 aaKnown RBP6.17□□□□□ -1.42
USP8-218ENST00000561330 CALCOCO1Q9P1Z2 691 aa6.17□□□□□ -1.42
USP8-218ENST00000561330 THRAP3Q9Y2W1 955 aaKnown RBP6.17□□□□□ -1.42
USP8-218ENST00000561330 TCRBV7S2A1N4TA0A589 114 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 KIAA0391O15091 583 aaKnown RBP6.16□□□□□ -1.42
USP8-218ENST00000561330 MTHFD1P11586 935 aaKnown RBP6.16□□□□□ -1.42
USP8-218ENST00000561330 TACR2P21452 398 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 PTTG1IPP53801 180 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 DSC2Q02487 901 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 DACT2Q5SW24 774 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 FAM102AQ5T9C2 384 aaPredicted RBP6.16□□□□□ -1.42
USP8-218ENST00000561330 USP45Q70EL2 814 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 NLGN4YQ8NFZ3 816 aaPredicted RBP6.16□□□□□ -1.42
USP8-218ENST00000561330 JPH3Q8WXH2 748 aaPredicted RBP6.16□□□□□ -1.42
USP8-218ENST00000561330 CAMKK2Q96RR4 588 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 SLC46A2Q9BY10 475 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 RHOBTB2Q9BYZ6 727 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 MAN1C1Q9NR34 630 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 FBXO34Q9NWN3 711 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 ZIM2Q9NZV7 527 aa6.16□□□□□ -1.42
USP8-218ENST00000561330 PNMA8BQ9ULN7 279 aaPredicted RBP6.16□□□□□ -1.42
USP8-218ENST00000561330 REXO2Q9Y3B8 237 aaKnown RBP6.16□□□□□ -1.42
USP8-218ENST00000561330 NPIPB8E9PQR5 432 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 SPATA31D3P0C874 917 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 C6P13671 934 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 ZNF280AP59817 542 aaPredicted RBP6.15□□□□□ -1.42
USP8-218ENST00000561330 ZXDAP98168 799 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 TLE1Q04724 770 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 THEMIS2Q5TEJ8 643 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 SPATA31D4Q6ZUB0 917 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 CATIPQ7Z7H3 387 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 PRR18Q8N4B5 295 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 DCBLD1Q8N8Z6 715 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 DMRTA2Q96SC8 542 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 RTFDC1Q9BY42 306 aaPredicted RBP6.15□□□□□ -1.42
USP8-218ENST00000561330 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 CDH19Q9H159 772 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 GSTO2Q9H4Y5 243 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 ATP11BQ9Y2G3 1177 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 CHST2Q9Y4C5 530 aa6.15□□□□□ -1.42
USP8-218ENST00000561330 USP15Q9Y4E8 981 aaPredicted RBP6.15□□□□□ -1.42
USP8-218ENST00000561330 GAGE12BA1L429 117 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 GAGE12HA6NDE8 117 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 RNASET2O00584 256 aaKnown RBP6.14□□□□□ -1.43
USP8-218ENST00000561330 ZNF185O15231 689 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 GRM6O15303 877 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 RPS6KA4O75676 772 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 ZNF202O95125 648 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 ITGB1P05556 798 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 SLC6A2P23975 617 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 SMARCA1P28370 1054 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 KHDC1Q4VXA5 237 aaKnown RBP6.14□□□□□ -1.43
USP8-218ENST00000561330 PABPC1LQ4VXU2 614 aaKnown RBP6.14□□□□□ -1.43
USP8-218ENST00000561330 PDCD4Q53EL6 469 aaKnown RBP6.14□□□□□ -1.43
USP8-218ENST00000561330 AGAP9Q5VTM2 703 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 TSHZ3Q63HK5 1081 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 METRNLQ641Q3 311 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 RHOT2Q8IXI1 618 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 SYNE4Q8N205 404 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 FITM2Q8N6M3 262 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 ZNF483Q8TF39 744 aaPredicted RBP6.14□□□□□ -1.43
USP8-218ENST00000561330 JDP2Q8WYK2 163 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 VRK1Q99986 396 aaPredicted RBP6.14□□□□□ -1.43
USP8-218ENST00000561330 GTPBP4Q9BZE4 634 aaKnown RBP6.14□□□□□ -1.43
USP8-218ENST00000561330 ZNF768Q9H5H4 540 aaKnown RBP6.14□□□□□ -1.43
USP8-218ENST00000561330 NRDE2Q9H7Z3 1164 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 SLC2A4RGQ9NR83 387 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 POLHQ9Y253 713 aa6.14□□□□□ -1.43
USP8-218ENST00000561330 SLC16A6O15403 523 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 FZD7O75084 574 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 PPFIA4O75335 1185 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 CD1AP06126 327 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 MALP21145 153 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 CYP2C19P33261 490 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 PTGS2P35354 604 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 FAM189BP81408 668 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 PGS1Q32NB8 556 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 IFIT1BQ5T764 474 aaKnown RBP6.13□□□□□ -1.43
USP8-218ENST00000561330 FNDC7Q5VTL7 733 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 RAVER1Q8IY67 606 aaKnown RBP6.13□□□□□ -1.43
USP8-218ENST00000561330 C3orf20Q8ND61 904 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 OR56A1Q8NGH5 318 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 HAS1Q92839 578 aa6.13□□□□□ -1.43
USP8-218ENST00000561330 RGMAQ96B86 450 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms