RNA–Protein interactions for RNA: ENST00000552674.5

SMARCC2-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-214ENST00000552674 TDRD3Q9H7E2 651 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 MRPL47Q9HD33 250 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 SLCO1B3Q9NPD5 702 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 OLFML3Q9NRN5 406 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 METTL5Q9NRN9 209 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 GTF3C4Q9UKN8 822 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 RPTORQ8N122 1335 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 TRPM3Q9HCF6 1732 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 DENND3A2RUS2 1198 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 MAP3K7O43318 606 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 EPHB2P29323 1055 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 CPA2P48052 419 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 NOP14P78316 857 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 C11orf63Q6NUN7 778 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 LVRNQ6Q4G3 990 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 ZDHHC24Q6UX98 284 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 NOP9Q86U38 636 aaKnown RBP10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 CBWD2Q8IUF1 395 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 RHOT1Q8IXI2 618 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 HIPK4Q8NE63 616 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 ACSF2Q96CM8 615 aaPredicted RBP10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 TTC1Q99614 292 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 SH3GL3Q99963 347 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 COA1Q9GZY4 146 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 MYLK2Q9H1R3 596 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 GPRC5CQ9NQ84 441 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 ZDHHC18Q9NUE0 388 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 ZFATQ9P243 1243 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 POLLQ9UGP5 575 aa10.05□□□□□ -0.8
SMARCC2-214ENST00000552674 O00370 1275 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 PIAS1O75925 651 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 KRT10P13645 584 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 SHMT1P34896 483 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 HSPA1LP34931 641 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 ARFIP2P53365 341 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 DRG2P55039 364 aaKnown RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 BPIFB4P59827 614 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 PPP3CAQ08209 521 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 SNRNP35Q16560 246 aaKnown RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 SHROOM1Q2M3G4 852 aaPredicted RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 PIGWQ7Z7B1 504 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 CKAP2Q8WWK9 683 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 CEP170P1Q96L14 293 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 RMDN2Q96LZ7 410 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 ZWILCHQ9H900 591 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 SIX2Q9NPC8 291 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 NINJ2Q9NZG7 142 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 PPARGC1AQ9UBK2 798 aaKnown RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 PCYOX1Q9UHG3 505 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 PRR12Q9ULL5 1215 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 SLITRK3O94933 977 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 KITP10721 976 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 CYP11B1P15538 503 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 RRM1P23921 792 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 PRR5LQ6MZQ0 368 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 FOXR2Q6PJQ5 311 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 FAM228AQ86W67 206 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 OGFOD1Q8N543 542 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 TRIM11Q96F44 468 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 FAM161BQ96MY7 647 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 TOPORSQ9NS56 1045 aaPredicted RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 GRHL1Q9NZI5 618 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 WHRNQ9P202 907 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 STXBP5LQ9Y2K9 1186 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 PCDHA2Q9Y5H9 948 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 AFF2P51816 1311 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 NVLO15381 856 aaKnown RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 C21orf2O43822 256 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 SREBF1P36956 1147 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 NR1H3Q13133 447 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 TAF1BQ53T94 588 aaPredicted RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 SPDYCQ5MJ68 293 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 MTDHQ86UE4 582 aaKnown RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 NLRX1Q86UT6 975 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 CCDC110Q8TBZ0 833 aa10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 ZNF526Q8TF50 670 aaPredicted RBP10.04□□□□□ -0.8
SMARCC2-214ENST00000552674 STRCQ7RTU9 1775 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 NCANO14594 1321 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 LRRIQ4A6NIV6 560 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 MEIS2O14770 477 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 TJP3O95049 919 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 ARP10275 920 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 KRT4P19013 534 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 MARK3P27448 753 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 CCNHP51946 323 aaPredicted RBP10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 RCN1Q15293 331 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 EMC10Q5UCC4 262 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 DNAJC24Q6P3W2 148 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 CCDC125Q86Z20 511 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 MAGEC3Q8TD91 643 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 CALN1Q9BXU9 219 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 PCDHA3Q9Y5H8 950 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 ENTPD5O75356 428 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 POLGP54098 1239 aaPredicted RBP10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 JAM2P57087 298 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 PPATQ06203 517 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 TRPC3Q13507 836 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 HYIQ5T013 277 aa10.03□□□□□ -0.8
SMARCC2-214ENST00000552674 UBAP2Q5T6F2 1119 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms