RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 CYB5D2Q8WUJ1 264 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 HERVK_113Q902F9 699 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 CNDP2Q96KP4 475 aaKnown RBP7.02□□□□□ -1.29
VPS29-210ENST00000552130 ZDHHC5Q9C0B5 715 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 NKX2-4Q9H2Z4 354 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 TRPV4Q9HBA0 871 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 PNPLA8Q9NP80 782 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 OBP2BQ9NPH6 170 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 KRT84Q9NSB2 600 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 KIF17Q9P2E2 1029 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 C19orf53Q9UNZ5 99 aaPredicted RBP7.02□□□□□ -1.29
VPS29-210ENST00000552130 AGTPBP1Q9UPW5 1226 aa7.02□□□□□ -1.29
VPS29-210ENST00000552130 RSF1Q96T23 1441 aaPredicted RBP7.01□□□□□ -1.29
VPS29-210ENST00000552130 HRKO00198 91 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 IPO5O00410 1097 aaKnown RBP7.01□□□□□ -1.29
VPS29-210ENST00000552130 SYT5O00445 386 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 APOL1O14791 398 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 PSPNO60542 156 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 PLA2G6O60733 806 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 FSBPO95073 299 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 RTN3O95197 1032 aaPredicted RBP7.01□□□□□ -1.29
VPS29-210ENST00000552130 SGPL1O95470 568 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 EFEMP2O95967 443 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 MT-ND3P03897 115 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 ADRB2P07550 413 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 THEGLP0DJG4 465 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 OSMP13725 252 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 ALOX15P16050 662 aaPredicted RBP7.01□□□□□ -1.29
VPS29-210ENST00000552130 CD247P20963 164 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 HOXD13P35453 343 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 CD86P42081 329 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 PHKA1P46020 1223 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 POLD2P49005 469 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 GPR85P60893 370 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 UBXN1Q04323 297 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 CALD1Q05682 793 aaKnown RBP7.01□□□□□ -1.29
VPS29-210ENST00000552130 RASA2Q15283 850 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 SLC35G1Q2M3R5 365 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 TRIM68Q6AZZ1 485 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 DENND5AQ6IQ26 1287 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 RPUSD3Q6P087 351 aaKnown RBP7.01□□□□□ -1.29
VPS29-210ENST00000552130 CNSTQ6PJW8 725 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 LBX2Q6XYB7 198 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 OVCH1Q7RTY7 1134 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 NLRP14Q86W24 1093 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 TCP11L2Q8N4U5 519 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 RNF152Q8N8N0 203 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 ZNF610Q8N9Z0 462 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 PCDH19Q8TAB3 1148 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 RNF141Q8WVD5 230 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 DACT3Q96B18 629 aaPredicted RBP7.01□□□□□ -1.29
VPS29-210ENST00000552130 COA7Q96BR5 231 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 SLC2A13Q96QE2 648 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 ZFYVE21Q9BQ24 234 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 COLEC11Q9BWP8 271 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 STK33Q9BYT3 514 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 C22orf23Q9BZE7 217 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 SIL1Q9H173 461 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 XAB2Q9HCS7 855 aaKnown RBP7.01□□□□□ -1.29
VPS29-210ENST00000552130 COMMD8Q9NX08 183 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 MBD1Q9UIS9 605 aaPredicted RBP7.01□□□□□ -1.29
VPS29-210ENST00000552130 SMC3Q9UQE7 1217 aa7.01□□□□□ -1.29
VPS29-210ENST00000552130 RFXAPO00287 272 aa7□□□□□ -1.29
VPS29-210ENST00000552130 TRIM38O00635 465 aa7□□□□□ -1.29
VPS29-210ENST00000552130 NPC1O15118 1278 aa7□□□□□ -1.29
VPS29-210ENST00000552130 KDM1AO60341 852 aa7□□□□□ -1.29
VPS29-210ENST00000552130 CLTBP09497 229 aa7□□□□□ -1.29
VPS29-210ENST00000552130 ITGA4P13612 1032 aa7□□□□□ -1.29
VPS29-210ENST00000552130 KRT10P13645 584 aa7□□□□□ -1.29
VPS29-210ENST00000552130 LTKP29376 864 aa7□□□□□ -1.29
VPS29-210ENST00000552130 SERPINF1P36955 418 aa7□□□□□ -1.29
VPS29-210ENST00000552130 CEBPAP49715 358 aaPredicted RBP7□□□□□ -1.29
VPS29-210ENST00000552130 CASP6P55212 293 aa7□□□□□ -1.29
VPS29-210ENST00000552130 ARF3P61204 181 aaPredicted RBP7□□□□□ -1.29
VPS29-210ENST00000552130 ARF1P84077 181 aaKnown RBP7□□□□□ -1.29
VPS29-210ENST00000552130 SURF1Q15526 300 aa7□□□□□ -1.29
VPS29-210ENST00000552130 ARHGAP44Q17R89 818 aa7□□□□□ -1.29
VPS29-210ENST00000552130 TIGD6Q17RP2 521 aa7□□□□□ -1.29
VPS29-210ENST00000552130 ANKRD39Q53RE8 183 aa7□□□□□ -1.29
VPS29-210ENST00000552130 TOR2AQ5JU69 321 aa7□□□□□ -1.29
VPS29-210ENST00000552130 CCDC91Q7Z6B0 441 aa7□□□□□ -1.29
VPS29-210ENST00000552130 MOGAT3Q86VF5 341 aa7□□□□□ -1.29
VPS29-210ENST00000552130 THEMISQ8N1K5 641 aaPredicted RBP7□□□□□ -1.29
VPS29-210ENST00000552130 AVL9Q8NBF6 648 aa7□□□□□ -1.29
VPS29-210ENST00000552130 PUM2Q8TB72 1066 aaKnown RBP eCLIP7□□□□□ -1.294e-11■■■■□ 26.4
VPS29-210ENST00000552130 RUFY2Q8WXA3 655 aa7□□□□□ -1.29
VPS29-210ENST00000552130 MUL1Q969V5 352 aa7□□□□□ -1.29
VPS29-210ENST00000552130 ACAP3Q96P50 834 aa7□□□□□ -1.29
VPS29-210ENST00000552130 YME1L1Q96TA2 773 aa7□□□□□ -1.29
VPS29-210ENST00000552130 PHF20Q9BVI0 1012 aa7□□□□□ -1.29
VPS29-210ENST00000552130 PIH1D1Q9NWS0 290 aaKnown RBP7□□□□□ -1.29
VPS29-210ENST00000552130 ATP6V0A2Q9Y487 856 aa7□□□□□ -1.29
VPS29-210ENST00000552130 CCDC66A2RUB6 948 aa6.99□□□□□ -1.29
VPS29-210ENST00000552130 H7C1D1 291 aa6.99□□□□□ -1.29
VPS29-210ENST00000552130 LRRN2O75325 713 aa6.99□□□□□ -1.29
VPS29-210ENST00000552130 TBCAO75347 108 aaKnown RBP6.99□□□□□ -1.29
VPS29-210ENST00000552130 IL18RAPO95256 599 aa6.99□□□□□ -1.29
VPS29-210ENST00000552130 P4HA1P13674 534 aa6.99□□□□□ -1.29
VPS29-210ENST00000552130 ATP5DP30049 168 aa6.99□□□□□ -1.29
VPS29-210ENST00000552130 IL12RB1P42701 662 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms