RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MYPNQ86TC9 1320 aa5.68□□□□□ -1.5
LSM3P2-201ENST00000551246 METP08581 1390 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 A0A0A0MRY4 1105 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 KLF18A0A0U1RQI7 1052 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 MACROD2A1Z1Q3 448 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 CCDC169A6NNP5 214 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 VILLO15195 856 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 HNRNPRO43390 633 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 RANBP6O60518 1105 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 HNRNPCL1O60812 293 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 DEAF1O75398 565 aaPredicted RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 KCNA3P22001 575 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 FUT4P22083 530 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 GNA15P30679 374 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 TCF7P36402 384 aaPredicted RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 GRIA2P42262 883 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 MATR3P43243 847 aaKnown RBP eCLIP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 MAGEA1P43355 309 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 KIF11P52732 1056 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SESN3P58005 492 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SLC34A1Q06495 639 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 KLRC3Q07444 240 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 TBL3Q12788 808 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 PRPF4BQ13523 1007 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 RCN2Q14257 317 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SPA17Q15506 151 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 KRT71Q3SY84 523 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 MIIPQ5JXC2 388 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SYCP2LQ5T4T6 812 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 MFSD4BQ5TF39 518 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SNX30Q5VWJ9 437 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 HGSNATQ68CP4 663 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 BORAQ6PGQ7 559 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 FOXR2Q6PJQ5 311 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 NXPE4Q6UWF7 544 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 OLFML1Q6UWY5 402 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 ZDHHC24Q6UX98 284 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 KRT26Q7Z3Y9 468 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SLFN11Q7Z7L1 901 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 ADGRG6Q86SQ4 1221 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SGMS1Q86VZ5 419 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 WFDC8Q8IUA0 241 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 DMRTC2Q8IXT2 367 aaPredicted RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 ZBED8Q8IZ13 594 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SYT2Q8N9I0 419 aaPredicted RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 C3orf58Q8NDZ4 430 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 TTC8Q8TAM2 541 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 WDR66Q8TBY9 1149 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 FNDC8Q8TC99 324 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 NELFBQ8WX92 580 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 BSNDQ8WZ55 320 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SYN2Q92777 582 aaPredicted RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SUCLG2Q96I99 432 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 COG3Q96JB2 828 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 NOX5Q96PH1 765 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 NAP1L3Q99457 506 aaPredicted RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 TBC1D10AQ9BXI6 508 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 BCO2Q9BYV7 579 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 DDX47Q9H0S4 455 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 CSRNP2Q9H175 543 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 MUC3BQ9H195 1237 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 PABPC3Q9H361 631 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 GPR108Q9NPR9 543 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SAR1AQ9NR31 198 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 METTL5Q9NRN9 209 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 INTS9Q9NV88 658 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 NLRP2Q9NX02 1062 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 STX18Q9P2W9 335 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 DBF4Q9UBU7 674 aaPredicted RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF212Q9UDV6 495 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 DNAJB4Q9UDY4 337 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 ABCF2Q9UG63 623 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 CTNND2Q9UQB3 1225 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 SSX2IPQ9Y2D8 614 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 PARP4Q9UKK3 1724 aaKnown RBP5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 MAST3O60307 1309 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 ABCB11O95342 1321 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 PASKQ96RG2 1323 aa5.67□□□□□ -1.5
LSM3P2-201ENST00000551246 A2ML1A8K2U0 1454 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 NWD2Q9ULI1 1742 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 AKAP12Q02952 1782 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 CASZ1Q86V15 1759 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 A0A096LPE4 126 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 A0A1W2PPZ6 126 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PI4KAP2A4QPH2 592 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 TRIM43BA6NCK2 446 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 EIF4E1BA6NMX2 242 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 GOLGA8BA8MQT2 603 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 FAM229AH3BQW9 127 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 IPO5O00410 1097 aaKnown RBP5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 KLRC4O43908 158 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF862O60290 1169 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PFDN1O60925 122 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 TCEA3O75764 348 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 KRT38O76015 456 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 MMP1P03956 469 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 VDRP11473 427 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 ALAS1P13196 640 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 IFNAR1P17181 557 aa5.66□□□□□ -1.5
LSM3P2-201ENST00000551246 PTPN2P17706 415 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms